RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SDC4P31431 198 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 THBS4P35443 961 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 IDUAP35475 653 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ACVR1BP36896 505 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 USP8P40818 1118 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 SLC26A3P40879 764 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 CYB561P49447 251 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 HLCSP50747 726 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 AGFG1P52594 562 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 ARFIP2P53365 341 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ITGA8P53708 1063 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 LINC00205P59089 165 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RPL26P61254 145 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 PPIAP62937 165 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 PRKG2Q13237 762 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 KRT33BQ14525 404 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 SQLEQ14534 574 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RABEP1Q15276 862 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 CA9Q16790 459 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TMEM249Q2WGJ8 235 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 BTBD16Q32M84 506 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 KLHL22Q53GT1 634 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 FAM120AOSQ5T036 256 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 PXDC1Q5TGL8 231 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 FIGLAQ6QHK4 219 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TRILQ7L0X0 811 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 MDGA2Q7Z553 956 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RPS19BP1Q86WX3 136 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 CFAP206Q8IYR0 622 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RFLNBQ8N5W9 214 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TEX26Q8N6G2 289 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 OR2L2Q8NH16 312 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ARRDC2Q8TBH0 407 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 M1APQ8TC57 530 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 NAT14Q8WUY8 206 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RBM41Q96IZ5 413 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 CAPZA3Q96KX2 299 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TNFRSF13CQ96RJ3 184 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 SMC6Q96SB8 1091 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 CYTH2Q99418 400 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 FAM118BQ9BPY3 351 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 TDRD1Q9BXT4 1180 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 ANGPTL4Q9BY76 406 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ASB8Q9H765 288 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 MMP25Q9NPA2 562 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 DEPPQ9NTK1 212 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 ALKBH4Q9NXW9 302 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 NFKBIL1Q9UBC1 381 aaPredicted RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 ZNF580Q9UK33 172 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 DNPEPQ9ULA0 475 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 RPL26L1Q9UNX3 145 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 ICKQ9UPZ9 632 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 EIF3LQ9Y262 564 aaKnown RBP3.43□□□□□ -1.86
HERC1-211ENST00000560983 WIF1Q9Y5W5 379 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 DOCK4Q8N1I0 1966 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 CCDC88CQ9P219 2028 aa3.43□□□□□ -1.86
HERC1-211ENST00000560983 NUP210LQ5VU65 1888 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 A0A087WWL8 130 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 A0A088AWK7 358 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LOC105369274A0A096LPK9 316 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LOC102723532A0A0G2JNH3 316 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 LOC100653049A0A140TA62 436 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 OR2W5A6NFC9 320 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 H3BUI4 141 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 FOXN3O00409 490 aaPredicted RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 CASKO14936 926 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A9O60656 530 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TMCC2O75069 709 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 KRT34O76011 436 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SNUPNO95149 360 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 EPPINO95925 133 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 C8orf89P0DMQ9 161 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 GABRA1P14867 456 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UGT1A6P19224 532 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 CCND1P24385 295 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 FPR3P25089 353 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 PBLDP30039 288 aaPredicted RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 HTR7P34969 479 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TIMP3P35625 211 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 PRCPP42785 496 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 CASP9P55211 416 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 UCP3P55916 312 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 MLF1P58340 268 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 TPI1P60174 286 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 VLDLRP98155 873 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 FKBP3Q00688 224 aaKnown RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 NIPAL4Q0D2K0 466 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 ZNF658BQ4V348 819 aaPredicted RBP3.42□□□□□ -1.86
HERC1-211ENST00000560983 TCTE1Q5JU00 501 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 WASHC2DQ5SRD0 308 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 FNBP1LQ5T0N5 605 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 MARC1Q5VT66 337 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 RESP18Q5W5W9 173 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 CYB5R2Q6BCY4 276 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SCYL2Q6P3W7 929 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 WDR59Q6PJI9 974 aa3.42□□□□□ -1.86
HERC1-211ENST00000560983 SARM1Q6SZW1 724 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms