RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CDC7O00311 574 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 SNX4O95219 450 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 GDF1P27539 372 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 GDF5P43026 501 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 RPL21P46778 160 aaKnown RBP16.99■□□□□ 0.31
TPM1-226ENST00000560959 PGGT1BP53609 377 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 WNT3P56703 355 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 Q5PR19 223 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 OR10G3Q8NGC4 313 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 WDR34Q96EX3 536 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 FBXL20Q96IG2 436 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 ZNF597Q96LX8 424 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 JSRP1Q96MG2 331 aaPredicted RBP16.99■□□□□ 0.31
TPM1-226ENST00000560959 DGAT2Q96PD7 388 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 WDR83Q9BRX9 315 aaKnown RBP16.99■□□□□ 0.31
TPM1-226ENST00000560959 UBQLN3Q9H347 655 aa16.99■□□□□ 0.31
TPM1-226ENST00000560959 EEF1E1-BLOC1S5C9J1V9 151 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 EEF1E1O43324 174 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 SCELO95171 688 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ATP5A1P25705 553 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 GGT5P36269 586 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 MSH2P43246 934 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 CDK9P50750 372 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 CYP1B1Q16678 543 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ZNF662Q6ZS27 426 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 UBE3DQ7Z6J8 389 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ADAMTSL2Q86TH1 951 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ACOT4Q8N9L9 421 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 BBOF1Q8ND07 529 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 FAM13CQ8NE31 585 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ZPLD1Q8TCW7 415 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 ZNF592Q92610 1267 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 PTCD3Q96EY7 689 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 ZFP3Q96NJ6 502 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 F2RL3Q96RI0 385 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 SECISBP2Q96T21 854 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 REPIN1Q9BWE0 567 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 MS4A12Q9NXJ0 267 aa16.98■□□□□ 0.31
TPM1-226ENST00000560959 FBN1P35555 2871 aaKnown RBP16.98■□□□□ 0.31
TPM1-226ENST00000560959 HIVEP2P31629 2446 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 COL6A5A8TX70 2615 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CAPN14A8MX76 684 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 H7C1Q1 480 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CASKO14936 926 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CLGNO14967 610 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 SMPD2O60906 423 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 PCSK6P29122 969 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 ID2Q02363 134 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 LAPTM5Q13571 262 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 TMEM35AQ53FP2 167 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CDKL4Q5MAI5 379 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
TPM1-226ENST00000560959 ZNF793Q6ZN11 406 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 SLC29A4Q7RTT9 530 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 CIARTQ8N365 385 aaPredicted RBP16.97■□□□□ 0.31
TPM1-226ENST00000560959 TANKQ92844 425 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 WDYHV1Q96HA8 205 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 TRIB1Q96RU8 372 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 EFCAB11Q9BUY7 163 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 RBM24Q9BX46 236 aaKnown RBP16.97■□□□□ 0.31
TPM1-226ENST00000560959 FETUBQ9UGM5 382 aa16.97■□□□□ 0.31
TPM1-226ENST00000560959 EIF3LQ9Y262 564 aaKnown RBP16.97■□□□□ 0.31
TPM1-226ENST00000560959 IQANK1A0A1B0GTG1 560 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 SH3D21A4FU49 640 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 NPEPPSL1A6NEC2 478 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 OR6C76A6NM76 312 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 TP53I11O14683 189 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 FGF17O60258 216 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 ERN1O75460 977 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 TRAPPC6AO75865 159 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 BMP7P18075 431 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 HIST1H1TP22492 207 aaPredicted RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 CPN2P22792 545 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 CXCR5P32302 372 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 PCYT1AP49585 367 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 AGFG1P52594 562 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 EEF1A1P68104 462 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 PPP2R2BQ00005 443 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 PLIN5Q00G26 463 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 RNASEH2BQ5TBB1 312 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 EEF1A1P5Q5VTE0 462 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 FRA10AC1Q70Z53 315 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 TAGAPQ8N103 731 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 TCAIMQ8N3R3 496 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 LRRN4CLQ8ND94 238 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 TRIM58Q8NG06 486 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 NANOS1Q8WY41 292 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 DIO2Q92813 273 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 PELOQ9BRX2 385 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 SFXN3Q9BWM7 321 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 ANGPTL4Q9BY76 406 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 WWTR1Q9GZV5 400 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 CNOT10Q9H9A5 744 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
TPM1-226ENST00000560959 DNAJC11Q9NVH1 559 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 CTNNAL1Q9UBT7 734 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 NDRG3Q9UGV2 375 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 CAMK2AQ9UQM7 478 aa16.96■□□□□ 0.31
TPM1-226ENST00000560959 PRAMEF4O60810 478 aa16.95■□□□□ 0.3
TPM1-226ENST00000560959 ACSL3O95573 720 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms