RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CASKO14936 926 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 OR10H2O60403 315 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ERN1O75460 977 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 EPPINO95925 133 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 HEXAP06865 529 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PCNAP12004 261 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF37AP17032 561 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 SERPINB3P29508 390 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 SLC12A2P55011 1212 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PPP2R2BQ00005 443 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PLIN5Q00G26 463 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 DAZAP2Q15038 168 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 TSNQ15631 228 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 HIST2H2ACQ16777 129 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PPP1R3AQ16821 1122 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 AP5B1Q2VPB7 878 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBXO48Q5FWF7 155 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PIGGQ5H8A4 983 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 TEDDM1Q5T9Z0 273 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 HIST2H2AA3Q6FI13 130 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ADNP2Q6IQ32 1131 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 SEM1Q6ZVN7 128 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ADAMTSL2Q86TH1 951 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PM20D2Q8IYS1 436 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 OR10G3Q8NGC4 313 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PAQR8Q8TEZ7 354 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF721Q8TF20 911 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 EXT2Q93063 718 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 PPWD1Q96BP3 646 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 RBM18Q96H35 190 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 SENP5Q96HI0 755 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 MS4A14Q96JA4 679 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 NAT9Q9BTE0 207 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 CAPS2Q9BXY5 557 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 DNAJC11Q9NVH1 559 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 CNIH4Q9P003 139 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF629Q9UEG4 869 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 CHMP2BQ9UQN3 213 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 EIF3LQ9Y262 564 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 GOLGA6L10A0A0M3HER8 536 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 FAM95CA0A1B0GW59 222 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 LRRC3CA6NJW4 275 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SAP18O00422 153 aaKnown RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SMPD2O60906 423 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ACSL3O95573 720 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 LY6G6DO95868 133 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 S100BP04271 92 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 HOXC12P31275 282 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 CEACAM8P31997 349 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 OPRM1P35372 400 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 RAP1GDS1P52306 607 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF136P52737 540 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 HERVK_113P63132 956 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ERVK-8P63133 956 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 CDKL1Q00532 357 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 RCAN2Q14206 197 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF791Q3KP31 576 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBXL19-AS1Q494R0 122 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 PAGE2BQ5JRK9 111 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 Q5PR19 223 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SHEQ5VZ18 495 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 RNF111Q6ZNA4 994 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 LUZP2Q86TE4 346 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 C9orf40Q8IXQ3 194 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 LRRC25Q8N386 305 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SRFBP1Q8NEF9 429 aaKnown RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 NUBPLQ8TB37 319 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ESAMQ96AP7 390 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 PDLIM5Q96HC4 596 aaKnown RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 VPS39Q96JC1 886 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 NAP1L3Q99457 506 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 RBM24Q9BX46 236 aaKnown RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ERVK-6Q9BXR3 956 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 PHACTR1Q9C0D0 580 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 KCNF1Q9H3M0 494 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 CNOT10Q9H9A5 744 aaKnown RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 LYRM4Q9HD34 91 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ACKR4Q9NPB9 350 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 BEX4Q9NWD9 120 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 QPCTLQ9NXS2 382 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 ERVK-19Q9WJR5 959 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SLC6A5Q9Y345 797 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
CDC42BPB-207ENST00000560492 SH3D21A4FU49 640 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CAPN14A8MX76 684 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 H7C1Q1 480 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TP53I11O14683 189 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ST8SIA5O15466 376 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 FGF17O60258 216 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CCNT2O60583 730 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TGFB1P01137 390 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TMIGD3P0DMS9 266 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CD53P19397 219 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ATP5A1P25705 553 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CTSSP25774 331 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TLX1P31314 330 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 GCKP35557 465 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms