RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 TMEM200CA6NKL6 621 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ITM2AO43736 263 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PCDH7O60245 1069 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 NPHS1O60500 1241 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 LINC00032P0C843 101 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ALOX15P16050 662 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CD96P40200 585 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ALDH9A1P49189 494 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 TNFSF10P50591 281 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 XKP51811 444 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 MLF1P58340 268 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 TAS2R50P59544 299 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 NAA20P61599 178 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DUSP2Q05923 314 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SERTAD2Q14140 314 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF169Q14929 603 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PRSS53Q2L4Q9 553 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 Q6ZSR9 355 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 OR6Y1Q8NGX8 325 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SLC2A12Q8TD20 617 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF721Q8TF20 911 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 RBM18Q96H35 190 aaKnown RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SENP5Q96HI0 755 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SIGLEC12Q96PQ1 595 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PAIP2Q9BPZ3 127 aaKnown RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 GIMAP2Q9UG22 337 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 MCM8Q9UJA3 840 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DLGAP4Q9Y2H0 992 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 TRAF6Q9Y4K3 522 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CCL27Q9Y4X3 112 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DNAJC15Q9Y5T4 150 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ERAL1O75616 437 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 IL3P08700 152 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 CT62P0C5K7 136 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 DHRS4L1P0CG22 281 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 FEN1P39748 380 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 MAGOHP61326 146 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 AP2B1P63010 937 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ACSM2AQ08AH3 577 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ASPHQ12797 758 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TLR1Q15399 786 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TERF2Q15554 542 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 CHI3L2Q15782 390 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 KANK2Q63ZY3 851 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ACSM2BQ68CK6 577 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 OR4K14Q8NGD5 310 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 OR14A16Q8NHC5 309 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 MGARPQ8TDB4 240 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 C16orf78Q8WTQ4 265 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 DAZLQ92904 295 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 C11orf24Q96F05 449 aaPredicted RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 CNPPD1Q9BV87 410 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 ASF1BQ9NVP2 202 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 TEKT2Q9UIF3 430 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 PCDHGA10Q9Y5H3 936 aa12.87□□□□□ -0.35
TSPAN3-205ENST00000558745 CPAMD8Q8IZJ3 1885 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 GNG14A0A1W2PPG7 69 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 WWP2O00308 870 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 OR10H2O60403 315 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF354AO60765 605 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 SEC22BO75396 215 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ZFAND5O76080 213 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 FGF4P08620 206 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ANXA4P09525 319 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 BGNP21810 368 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 PIK3R1P27986 724 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 TIA1P31483 386 aaKnown RBP eCLIP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ERVK-8P63133 956 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 FOXK1P85037 733 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 SLC48A1Q6P1K1 146 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 CROCCP2Q86T23 111 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF227Q86WZ6 799 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 ST13P4Q8IZP2 240 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 CLYBLQ8N0X4 340 aa12.86□□□□□ -0.35
TSPAN3-205ENST00000558745 MORN4Q8NDC4 146 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms