RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 DPEP2Q9H4A9 486 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 MAGIXQ9H6Y5 334 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 NANOGQ9H9S0 305 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 LIN28AQ9H9Z2 209 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 DYRK4Q9NR20 520 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PNPLA3Q9NST1 481 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 DUS2Q9NX74 493 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 CMTM6Q9NX76 183 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 GDE1Q9NZC3 331 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 KLQ9UEF7 1012 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PDE10AQ9Y233 779 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 BTBD3Q9Y2F9 522 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PTRH2Q9Y3E5 179 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 AP4B1Q9Y6B7 739 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PRSS21Q9Y6M0 314 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 A0A096LPI6 279 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 A0A0G2JNJ9 132 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RNF103-CHMP3A0A140T963 221 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 A4D1N5 150 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 EVPLLA8MZ36 301 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 GPR89AB7ZAQ6 455 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 TEX22C9J3V5 150 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 H0YIV9 168 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ANKRD28O15084 1053 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ARPC2O15144 300 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 KCNJ13O60928 360 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 NOL3O60936 208 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 PSIP1O75475 530 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 CLPTM1O96005 669 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 HPRP00739 348 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RPN2P04844 631 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 FESP07332 822 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RETP07949 1114 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ELFN1P0C7U0 828 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 GPR89BP0CG08 455 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 G6PDP11413 515 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 LHCGRP22888 699 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 TEAD1P28347 426 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 PRDX3P30048 256 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 SERPINB1P30740 379 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 MTHFRP42898 656 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SLC15A1P46059 708 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 GSTM5P46439 218 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 PRLHRP49683 370 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 STK19P49842 368 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 ERVFC1P60507 584 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RPS14P62263 151 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 IRF8Q02556 426 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ABHD18Q0P651 414 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 HSPA14Q0VDF9 509 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ELAVL3Q14576 367 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 ABRAXAS2Q15018 415 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 KIAA0040Q15053 153 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ATP6AP1Q15904 470 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 HIST2H2ACQ16777 129 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 PHKG1Q16816 387 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 LRRC36Q1X8D7 754 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RFX4Q33E94 735 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SYTL3Q4VX76 610 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 LIN52Q52LA3 116 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RFTN2Q52LD8 501 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 TOR1AIP1Q5JTV8 583 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 LRIF1Q5T3J3 769 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 FRG2Q64ET8 278 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 HIST2H2AA3Q6FI13 130 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 GLYATQ6IB77 296 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 TSPAN33Q86UF1 283 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SPPL2CQ8IUH8 684 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 PEX5LQ8IYB4 626 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SVOPLQ8N434 492 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 FBXL6Q8N531 539 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 RNF148Q8N7C7 305 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SNX31Q8N9S9 440 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 TERB1Q8NA31 727 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ZBTB44Q8NCP5 570 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 OR6K2Q8NGY2 324 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 OR2T11Q8NH01 316 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ZFP28Q8NHY6 868 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 DNAJB14Q8TBM8 379 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 PNPT1Q8TCS8 783 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 BPIFB1Q8TDL5 484 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 SETD7Q8WTS6 366 aaKnown RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 SKA2Q8WVK7 121 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 CANT1Q8WVQ1 401 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 GLYATL1Q969I3 302 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 LINC00615Q96LM1 132 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 FRG2BQ96QU4 278 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 TMEM79Q9BSE2 394 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 NAA11Q9BSU3 229 aaPredicted RBP6.86□□□□□ -1.31
MARK3-212ENST00000558223 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 ANKRD60Q9BZ19 345 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 EHD1Q9H4M9 534 aa6.86□□□□□ -1.31
MARK3-212ENST00000558223 CLMPQ9H6B4 373 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms