RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
LDLR-207ENST00000558013 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 C12orf76Q8N812 135 aaPredicted RBP12.23□□□□□ -0.45
LDLR-207ENST00000558013 MRPL43Q8N983 215 aaKnown RBP12.23□□□□□ -0.45
LDLR-207ENST00000558013 MINDY2Q8NBR6 621 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 KBTBD8Q8NFY9 601 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 CDCA4Q9BXL8 241 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 XKR8Q9H6D3 395 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 EHD3Q9NZN3 535 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 ATG2BQ96BY7 2078 aa12.23□□□□□ -0.45
LDLR-207ENST00000558013 IFNA14P01570 189 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 HBQ1P09105 142 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ADH5P11766 374 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ADRB3P13945 408 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TCEA2Q15560 299 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ARHGAP15Q53QZ3 475 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ZNF362Q5T0B9 420 aaPredicted RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 PNCKQ6P2M8 343 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 FBXO15Q8NCQ5 510 aaPredicted RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 OR2L2Q8NH16 312 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TREX2Q9BQ50 279 aaPredicted RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 SNTG1Q9NSN8 517 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TVP23BQ9NYZ1 205 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TBC1D14Q9P2M4 693 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 KCND3Q9UK17 655 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 CARD8Q9Y2G2 431 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 GPC6Q9Y625 555 aaPredicted RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 HEATR5BQ9P2D3 2071 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 HTR3EA5X5Y0 456 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 HEPACAM2A8MVW5 462 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TAF4O00268 1085 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 CCRL2O00421 344 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 CSO75390 466 aaKnown RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 GSTT2P0CG29 244 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 GSTT2BP0CG30 244 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SLC15A1P46059 708 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 GJA8P48165 433 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 EPHA5P54756 1037 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 EIF4HQ15056 248 aaKnown RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SAXO2Q658L1 398 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 NEURL3Q96EH8 262 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 MAPKAP1Q9BPZ7 522 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 UCK2Q9BZX2 261 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SEMA3GQ9NS98 782 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 FBXL12Q9NXK8 326 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 MAPRE3Q9UPY8 281 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 YARS2Q9Y2Z4 477 aaKnown RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 DSPPQ9NZW4 1301 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 HAT1O14929 419 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 PDPK1O15530 556 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 PI15O43692 258 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TLX2O43763 284 aaPredicted RBP12.22□□□□□ -0.45
LDLR-207ENST00000558013 PTNP21246 168 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TNFSF8P32971 234 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ZNF181Q2M3W8 571 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 LRIT3Q3SXY7 679 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 LIPKQ5VXJ0 399 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ADCK2Q7Z695 626 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 UBE3DQ7Z6J8 389 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 NRSN1Q8IZ57 195 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 NEDD4LQ96PU5 975 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 TAPBPLQ9BX59 468 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 ASPNQ9BXN1 380 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 CFHR5Q9BXR6 569 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SLC25A19Q9HC21 320 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 SPATA7Q9P0W8 599 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 KLK4Q9Y5K2 254 aa12.22□□□□□ -0.45
LDLR-207ENST00000558013 MYO10Q9HD67 2058 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 EFCAB10A6NFE3 127 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 OR1F1O43749 312 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 SLC28A2O43868 658 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 PRKYO43930 277 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 PCCBP05166 539 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 HOXD12P35452 270 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 VEGFBP49765 207 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 PRKCDQ05655 676 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 SF3B4Q15427 424 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■□□ 18.3
LDLR-207ENST00000558013 GPR19Q15760 415 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 FLYWCH1Q4VC44 716 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 DCST1Q5T197 706 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 NXNL2Q5VZ03 156 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 PGBD2Q6P3X8 592 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 C19orf48Q6RUI8 117 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 ZNF367Q7RTV3 350 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 C17orf64Q86WR6 236 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 GPR151Q8TDV0 419 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 C17orf62Q9BQA9 187 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 AICDAQ9GZX7 198 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.45
LDLR-207ENST00000558013 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 SP140LQ9H930 580 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 SEC14L3Q9UDX4 400 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 WDR37Q9Y2I8 494 aa12.21□□□□□ -0.45
LDLR-207ENST00000558013 LOC110117498-PIK3R3F6TDL0 507 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms