RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 RGNQ15493 299 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 VMACQ2NL98 169 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 DEFB133Q30KQ1 61 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 ZNF750Q32MQ0 723 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 GRAMD1BQ3KR37 738 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 MTX3Q5HYI7 312 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.97□□□□□ -1.29
SPG11-204ENST00000557866 NDUFAF5Q5TEU4 345 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 WDR5BQ86VZ2 330 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 OOSP2Q86WS3 158 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 TMEM126BQ8IUX1 230 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 SHISA5Q8N114 240 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 ADCY4Q8NFM4 1077 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 TNIP2Q8NFZ5 429 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 OR52N2Q8NGI0 321 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 OR5P2Q8WZ92 322 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 EXOSC8Q96B26 276 aaKnown RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 ZNF764Q96H86 408 aaPredicted RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 NAF1Q96HR8 494 aaKnown RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 KCNC2Q96PR1 638 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 SLC29A1Q99808 456 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 MAPKAP1Q9BPZ7 522 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 SLC35A5Q9BS91 424 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 CHID1Q9BWS9 393 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 ASPSCR1Q9BZE9 553 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 GLIPR2Q9H4G4 154 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 UCK1Q9HA47 277 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 FAM60AQ9NP50 221 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 MIEF1Q9NQG6 463 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 AGPAT4Q9NRZ5 378 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 DCAF13Q9NV06 445 aaKnown RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 TAS2R9Q9NYW1 312 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 TAS2R7Q9NYW3 318 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 ZNF282Q9UDV7 671 aaPredicted RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 ANAPC2Q9UJX6 822 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 UTS2RQ9UKP6 389 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 CES1P1Q9UKY3 287 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 MRPS2Q9Y399 296 aaKnown RBP6.97□□□□□ -1.29
SPG11-204ENST00000557866 DTNAQ9Y4J8 743 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 LRP4O75096 1905 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 PLXND1Q9Y4D7 1925 aa6.97□□□□□ -1.29
SPG11-204ENST00000557866 GON4LQ3T8J9 2241 aa6.96□□□□□ -1.29
SPG11-204ENST00000557866 C7orf72A4D263 438 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 FAM149AA5PLN7 773 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 LILRA5A6NI73 299 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 GLOD5A6NK44 160 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 UPK1AO00322 258 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 ACOX3O15254 700 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 PDPK1O15530 556 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 HNRNPRO43390 633 aaKnown RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 PROM1O43490 865 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 GCM2O75603 506 aaPredicted RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 PRKD3O94806 890 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 UBXN7O94888 489 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 WNT11O96014 354 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SERPINA1P01009 418 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 C9P02748 559 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 PROS1P07225 676 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 RETP07949 1114 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 ETFAP13804 333 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 CKMT2P17540 419 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 IL1RNP18510 177 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 AFF3P51826 1226 aaKnown RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 CRYBA2P53672 197 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 GP2P55259 537 aaKnown RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 C21orf59P57076 290 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 EEF1A2Q05639 463 aaKnown RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 SIGLEC14Q08ET2 396 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 BNIP3Q12983 259 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SIM2Q14190 667 aaPredicted RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 SLC9A5Q14940 896 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 ATP6AP1Q15904 470 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 C14orf28Q4W4Y0 310 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 WDR45BQ5MNZ6 344 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SAXO2Q658L1 398 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 CDPF1Q6NVV7 123 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 TRIM40Q6P9F5 258 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 GALNT10Q86SR1 603 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 RNF130Q86XS8 419 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 EPHX4Q8IUS5 362 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SLC25A45Q8N413 288 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 ARHGEF39Q8N4T4 335 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SRFBP1Q8NEF9 429 aaKnown RBP6.96□□□□□ -1.3
SPG11-204ENST00000557866 OR10Q1Q8NGQ4 319 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 OR5AK3PQ8NH89 298 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 PSMA8Q8TAA3 256 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 FBXO30Q8TB52 745 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 ZCCHC10Q8TBK6 192 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 FBLIM1Q8WUP2 373 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 MAL2Q969L2 176 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 GAL3ST3Q96A11 431 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 FAM162AQ96A26 154 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 CCDC74AQ96AQ1 378 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 C10orf90Q96M02 699 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 DMRTB1Q96MA1 342 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 AMDHD1Q96NU7 426 aa6.96□□□□□ -1.3
SPG11-204ENST00000557866 SEPHS2Q99611 448 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms