RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 H2AFXP16104 143 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GNB3P16520 340 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF26P17031 533 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 PTBP1P26599 531 aaKnown RBP eCLIP1.5□□□□□ -2.179e-7■■■□□ 17.8
HIF1A-212ENST00000557538 GIFP27352 417 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RBMS1P29558 406 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 TLX1P31314 330 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 MNDAP41218 407 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 HTR2BP41595 481 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 TUFMP49411 452 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GUCY2DQ02846 1103 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF415Q09FC8 603 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CYLC2Q14093 348 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GRB14Q14449 540 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 PARP6Q2NL67 630 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 HFEQ30201 348 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 FUT10Q6P4F1 479 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 METAP1DQ6UB28 335 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 KDM7AQ6ZMT4 941 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RFPL4BQ6ZWI9 263 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZFAND4Q86XD8 727 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 FAM9CQ8IZT9 166 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 LGI2Q8N0V4 545 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CNNM3Q8NE01 707 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OR10Q1Q8NGQ4 319 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OR2T11Q8NH01 316 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SAP25Q8TEE9 199 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GRK7Q8WTQ7 553 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 APOBEC4Q8WW27 367 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GMPPAQ96IJ6 420 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 IFT74Q96LB3 600 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 INTS14Q96SY0 518 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 LPAR4Q99677 370 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 WWTR1Q9GZV5 400 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ADNPQ9H2P0 1102 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 DHX33Q9H6R0 707 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SPACA1Q9HBV2 294 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 MAN2C1Q9NTJ4 1040 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 BARHL2Q9NY43 387 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RCOR3Q9P2K3 495 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ATXN10Q9UBB4 475 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 APPL1Q9UKG1 709 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 VANGL2Q9ULK5 521 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ACEP12821 1306 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 MN1Q10571 1320 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 NRCAMQ92823 1304 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CASZ1Q86V15 1759 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GREB1LQ9C091 1923 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 IGHV4-4A0A075B6R2 117 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 A0A087WUV0 522 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 LRRIQ4A6NIV6 560 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 MPTX1A8MV57 137 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RTEL1-TNFRSF6BF6WH68 1400 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CCSO14618 274 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SLC9A3R1O14745 358 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 BET1O15155 118 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SERPINB7O75635 380 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SEC24AO95486 1093 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CAVIN2O95810 425 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GSRP00390 522 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GH1P01241 217 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 LAMC1P11047 1609 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 PDHBP11177 359 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GLRA2P23416 452 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ATP6V1E1P36543 226 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 HSPA13P48723 471 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CCNG1P51959 295 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 DVL1P1P54792 670 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 UBE2HP62256 183 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 GPM6BQ13491 265 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RRS1Q15050 365 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF74Q16587 644 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 NKAIN1Q4KMZ8 207 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 THEM4Q5T1C6 240 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 DEGS2Q6QHC5 323 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 RABEPKQ7Z6M1 372 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 KIF27Q86VH2 1401 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 CNTN4Q8IWV2 1026 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OR7G1Q8NGA0 311 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OR4D10Q8NGI6 311 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OR52M1Q8NGK5 317 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 DNASE2BQ8WZ79 361 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 STARD8Q92502 1023 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SLCO4A1Q96BD0 722 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 OPTNQ96CV9 577 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SCAF11Q99590 1463 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 PRMT1Q99873 361 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 C17orf62Q9BQA9 187 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 FRMD8P1Q9BZ68 369 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 TRIM4Q9C037 500 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 HOXD1Q9GZZ0 328 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 C1orf21Q9H246 121 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 AZI2Q9H6S1 392 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 TDRD3Q9H7E2 651 aaKnown RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 MINDY3Q9H8M7 445 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC4Q9HBW1 653 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 FAM207AQ9NSI2 230 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-212ENST00000557538 P4HTMQ9NXG6 502 aa1.5□□□□□ -2.17
HIF1A-212ENST00000557538 SPG21Q9NZD8 308 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms