RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CLEC2DQ9UHP7 191 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CD84Q9UIB8 345 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CLEC4EQ9ULY5 219 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 B4DXG7 233 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 POLR1CO15160 346 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TSPAN6O43657 245 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 OR10H3O60404 316 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TMCC2O75069 709 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 HLA-DQB1P01920 261 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 GAAP10253 952 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ACADMP11310 421 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 SYN1P17600 705 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 STK19P49842 368 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 LIM2P55344 173 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 DMPKQ09013 629 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 DUSP7Q16829 419 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ZMAT1Q5H9K5 638 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 LCN1P1Q5VSP4 162 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TXNDC8Q6A555 127 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF557Q8N988 423 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 NELL2Q99435 816 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 VN1R3Q9BXE9 311 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 NIPAL2Q9H841 368 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 IL21Q9HBE4 155 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TRIM39Q9HCM9 518 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 NEUROD4Q9HD90 331 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 ABCB9Q9NP78 766 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TIGARQ9NQ88 270 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 MIEF1Q9NQG6 463 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 PAQR5Q9NXK6 330 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-232ENST00000557487 CFAP97Q9P2B7 532 aa15.49■□□□□ 0.07
SHMT2-232ENST00000557487 TNRC18O15417 2968 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-232ENST00000557487 OR2AG2A6NM03 316 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 H3BN98 237 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 SH3BGRLO75368 114 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 CSF3P09919 207 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 NR2F6P10588 404 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 SDC2P34741 201 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 CTSOP43234 321 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-232ENST00000557487 CASP9P55211 416 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 TBPL1P62380 186 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 PPP3R1P63098 170 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 CAMK2BQ13554 666 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 DOC2BQ14184 412 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 PLK5Q496M5 336 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 CYP27C1Q4G0S4 372 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 PGBD2Q6P3X8 592 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 USP30Q70CQ3 517 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 HSD11B1LQ7Z5J1 315 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 LAPTM4BQ86VI4 370 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 OR5AK3PQ8NH89 298 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
SHMT2-232ENST00000557487 TMEM169Q96HH4 297 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 DIRAS2Q96HU8 199 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF354BQ96LW1 612 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF607Q96SK3 696 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 COQ7Q99807 217 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 MIXL1Q9H2W2 232 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 PRO3102Q9H379 93 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF334Q9HCZ1 680 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-232ENST00000557487 DIABLOQ9NR28 239 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 PHF11Q9UIL8 331 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 GSTK1Q9Y2Q3 226 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 INSL5Q9Y5Q6 135 aa15.48■□□□□ 0.07
SHMT2-232ENST00000557487 A0A1W2PQL4 384 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TMEM129A0AVI4 362 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TSPAN11A1L157 253 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 BNIP3LO60238 219 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 C1orf105O95561 183 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TSPAN19P0C672 248 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 NPPBP16860 134 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 MYL12AP19105 171 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 BMP8BP34820 402 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 RECQLP46063 649 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ARPC4P59998 168 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 MC1RQ01726 317 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLAMF1Q13291 335 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 CCSMST1Q4G0I0 132 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PPP2R2DQ66LE6 453 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TCTN3Q6NUS6 607 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 MZT2BQ6NZ67 158 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 CEACAM20Q6UY09 585 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF438Q7Z4V0 828 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PLCZ1Q86YW0 608 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PLA2G15Q8NCC3 412 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 WDR48Q8TAF3 677 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ENKURQ8TC29 256 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SETD7Q8WTS6 366 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 ZNF480Q8WV37 535 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SCAMP4Q969E2 229 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 TRMT61AQ96FX7 289 aaKnown RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 DMRTB1Q96MA1 342 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 SLC6A18Q96N87 628 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 FUZQ9BT04 418 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 C11orf54Q9H0W9 315 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-232ENST00000557487 RHCGQ9UBD6 479 aa15.47■□□□□ 0.07
SHMT2-232ENST00000557487 PLEKHB1Q9UF11 243 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms