RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 GDF1P27539 372 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 GGT5P36269 586 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 AGFG1P52594 562 aaKnown RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 DLG1Q12959 904 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 LAPTM5Q13571 262 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 SLC25A35Q3KQZ1 300 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 MED27Q6P2C8 311 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 SEM1Q6ZVN7 128 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 RAPH1Q70E73 1250 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 CTAGE3PQ8IX95 158 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 ULK2Q8IYT8 1036 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 LIX1Q8N485 282 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 PDPRQ8NCN5 879 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 TNIP2Q8NFZ5 429 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 OR8K3Q8NH51 312 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 WDR34Q96EX3 536 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 TSPAN17Q96FV3 270 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 MTERF1Q99551 399 aaKnown RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 TMUB1Q9BVT8 246 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 CD244Q9BZW8 370 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 ROGDIQ9GZN7 287 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 GSX1Q9H4S2 264 aaPredicted RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 RPF2Q9H7B2 306 aaKnown RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 PROK2Q9HC23 129 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 NSMCE4AQ9NXX6 385 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 ST6GALNAC2Q9UJ37 374 aa13.6□□□□□ -0.23
CHD8-211ENST00000556833 BOKQ9UMX3 212 aaPredicted RBP13.6□□□□□ -0.23
CHD8-211ENST00000556833 A0A1W2PS29 197 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 LRRC14BA6NHZ5 514 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 E7ESA3 106 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 ZSCAN12O43309 604 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 OR10H2O60403 315 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 ALOX15P16050 662 aaPredicted RBP13.59□□□□□ -0.23
CHD8-211ENST00000556833 PPP2R2AP63151 447 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 PLIN5Q00G26 463 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 TNFRSF17Q02223 184 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 KHDRBS2Q5VWX1 349 aaKnown RBP13.59□□□□□ -0.23
CHD8-211ENST00000556833 FBXW10Q5XX13 1052 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 OR4C11Q6IEV9 310 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 LRRC70Q7Z2Q7 622 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 TGIF2LYQ8IUE0 185 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 CREG2Q8IUH2 290 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 PRR22Q8IZ63 422 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 SRFBP1Q8NEF9 429 aaKnown RBP13.59□□□□□ -0.23
CHD8-211ENST00000556833 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 RMND5BQ96G75 393 aaPredicted RBP13.59□□□□□ -0.23
CHD8-211ENST00000556833 RBM18Q96H35 190 aaKnown RBP13.59□□□□□ -0.23
CHD8-211ENST00000556833 GPR22Q99680 433 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 RBBP8Q99708 897 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 DOHHQ9BU89 302 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 WWTR1Q9GZV5 400 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 KCNF1Q9H3M0 494 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 SH2D2AQ9NP31 389 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 ZFP64Q9NPA5 681 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 OPTCQ9UBM4 332 aa13.59□□□□□ -0.23
CHD8-211ENST00000556833 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 PLPP1O14494 284 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 DYRK3O43781 588 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 HCN1O60741 890 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
CHD8-211ENST00000556833 GBAP04062 536 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 IGKV3-11P04433 115 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 TACR1P25103 407 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 SSTR4P31391 388 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 PIK3CGP48736 1102 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 FBXW4P57775 412 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 RAB10P61026 200 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 ATP6V0D1P61421 351 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
CHD8-211ENST00000556833 FOXD4Q12950 439 aaPredicted RBP13.58□□□□□ -0.24
CHD8-211ENST00000556833 TOMM20Q15388 145 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 TMEM35AQ53FP2 167 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 RIPPLY2Q5TAB7 128 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 CHSY3Q70JA7 882 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 GPR180Q86V85 440 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 MMP21Q8N119 569 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 TEX9Q8N6V9 391 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 HUS1BQ8NHY5 278 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 NEIL3Q8TAT5 605 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 NUBPLQ8TB37 319 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 PAQR8Q8TEZ7 354 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 CDKL2Q92772 493 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 DIO2Q92813 273 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
CHD8-211ENST00000556833 CMTM7Q96FZ5 175 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 NUDT4Q9NZJ9 180 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 CAMK2AQ9UQM7 478 aa13.58□□□□□ -0.24
CHD8-211ENST00000556833 SLC6A5Q9Y345 797 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms