RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 AK1P00568 194 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 RPLP0P05388 317 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 RRASP10301 218 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 TNNI3P19429 210 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 ANOS1P23352 680 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 TMOD1P28289 359 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 SLC6A8P48029 635 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 LEPRP48357 1165 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 VEGFCP49767 419 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 LIMK2P53671 638 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 NLRP11P59045 1033 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 SNRPD1P62314 119 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 HMGN5P82970 282 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CCDC173Q0VFZ6 552 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 GCKRQ14397 625 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 WLSQ5T9L3 541 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 ASRGL1Q7L266 308 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 PTAR1Q7Z6K3 402 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 VPS36Q86VN1 386 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 DND1Q8IYX4 353 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CERS5Q8N5B7 392 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 MLKLQ8NB16 471 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 OR5M9Q8NGP3 310 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CD99L2Q8TCZ2 262 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 MRGPRDQ8TDS7 321 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 SELENOMQ8WWX9 145 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 TMEM45BQ96B21 275 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 PINX1Q96BK5 328 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 PIGQQ9BRB3 760 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CARD6Q9BX69 1037 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 HOXD1Q9GZZ0 328 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 GFRA4Q9GZZ7 299 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 KCNK13Q9HB14 408 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF71Q9NQZ8 489 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 AATFQ9NY61 560 aaKnown RBP eCLIP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 IL20RAQ9UHF4 553 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF490Q9ULM2 529 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 GAB2Q9UQC2 676 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 PPP1R3CQ9UQK1 317 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 CHMP2BQ9UQN3 213 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 FGD5Q6ZNL6 1462 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KIAA1210Q9ULL0 1709 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 FAM230AA0A1W2PPH8 454 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 C15orf61A6NNL5 157 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 INPP4BO15327 924 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 SIGLEC5O15389 551 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 CFLARO15519 480 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 MAGEC1O60732 1142 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 LRCH4O75427 683 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KHDRBS3O75525 346 aaKnown RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TOM1L1O75674 476 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 ANXA9O76027 345 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 IGHEP01854 428 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KRT6BP04259 564 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 GSTA1P08263 222 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TSPY4P0CV99 314 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TSPY10P0CW01 314 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 CEACAM1P13688 526 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 GLRA1P23415 457 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KRT6CP48668 564 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TRPC1P48995 793 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 FHITP49789 147 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 BACE1P56817 501 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 BTG1P62324 171 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 CSNK2BP67870 215 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 HSF2Q03933 536 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TPD52L1Q16890 204 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 WSCD2Q2TBF2 565 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 C14orf177Q52M58 125 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 AGKQ53H12 422 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 LIPJQ5W064 366 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF730Q6ZMV8 503 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 LCA5Q86VQ0 697 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KLHDC8BQ8IXV7 354 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 PARP8Q8N3A8 854 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 PDCL2Q8N4E4 241 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 ICA1LQ8NDH6 482 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 OR52B4Q8NGK2 314 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 RDH11Q8TC12 318 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TMEM37Q8WXS4 190 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 THRSPQ92748 146 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 NCLNQ969V3 563 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 AZIN2Q96A70 460 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF486Q96H40 463 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 PCED1BQ96HM7 432 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KRT12Q99456 494 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 DGCR6LQ9BY27 220 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 FAM124BQ9H5Z6 455 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 COQ10BQ9H8M1 238 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 FARSBQ9NSD9 589 aaKnown RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 C2orf42Q9NWW7 574 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 TECRQ9NZ01 308 aaKnown RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 NLGN3Q9NZ94 848 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KLHL8Q9P2G9 620 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 CGNQ9P2M7 1197 aaKnown RBP3.73□□□□□ -1.81
PRPF39-210ENST00000556718 KLK11Q9UBX7 282 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 WIPI2Q9Y4P8 454 aa3.73□□□□□ -1.81
PRPF39-210ENST00000556718 CEP164Q9UPV0 1460 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms