RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZNF766Q5HY98 468 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 LIPMQ5VYY2 423 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 FAM219BQ5XKK7 198 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 CLEC18BQ6UXF7 455 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 ST13P4Q8IZP2 240 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 HORMAD2Q8N7B1 307 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 BCORP1Q8N888 145 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 GBP7Q8N8V2 638 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 BANPQ8N9N5 519 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 CLEC18CQ8NCF0 446 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 METTL6Q8TCB7 284 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 SLC2A12Q8TD20 617 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 FAR1Q8WVX9 515 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 DGAT2Q96PD7 388 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 SIGLEC12Q96PQ1 595 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 HBEGFQ99075 208 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 IQCGQ9H095 443 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 C12orf65Q9H3J6 166 aaKnown RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 OXSMQ9NWU1 459 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 TEX10Q9NXF1 929 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-205ENST00000556310 ANKRD10Q9NXR5 420 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 DOPEY2Q9Y3R5 2298 aa10.74□□□□□ -0.69
SLIRP-205ENST00000556310 HECTD1Q9ULT8 2610 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ZGRF1Q86YA3 2104 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 MYOCOSA0A1B0GUC4 107 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 UBFD1O14562 309 aaKnown RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 DYRK3O43781 588 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 GUCY1B2O75343 617 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ULK1O75385 1050 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 NEURL1O76050 574 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ZFAND5O76080 213 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ZIC2O95409 532 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 GPR75O95800 540 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 KLK1P06870 262 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ALOX15P16050 662 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 TNNI3P19429 210 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 CD96P40200 585 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 HTR6P50406 440 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 MAPK12P53778 367 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 OC90Q02509 493 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 MRPL49Q13405 166 aaKnown RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 PCLAFQ15004 111 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 CFAP157Q5JU67 520 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 CCNYL2Q5T2Q4 361 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 NDUFAF5Q5TEU4 345 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 HSDL2Q6YN16 418 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 OR4N5Q8IXE1 308 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 SRRM1Q8IYB3 904 aaKnown RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 C1orf52Q8N6N3 182 aaKnown RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM178AQ8NBL3 297 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ST6GALNAC3Q8NDV1 305 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 OR8K3Q8NH51 312 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 THAP3Q8WTV1 239 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 SCMH1Q96GD3 660 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ART5Q96L15 291 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 C5orf34Q96MH7 638 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 TAAR6Q96RI8 345 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 KCNA7Q96RP8 456 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 SLX1AQ9BQ83 275 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 ACPTQ9BZG2 426 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 OR8D2Q9GZM6 311 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 TRIM45Q9H8W5 580 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-205ENST00000556310 MID1IP1Q9NPA3 183 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 OLAHQ9NV23 265 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 LRFN1Q9P244 771 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 COPS7AQ9UBW8 275 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 PLLPQ9Y342 182 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
SLIRP-205ENST00000556310 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 SERTM1A2A2V5 107 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ANKUB1A6NFN9 424 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 OR10H2O60403 315 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ITGA10O75578 1167 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 SLC25A12O75746 678 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 RASAL1O95294 804 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 CBX6O95503 412 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 IGKV3-11P04433 115 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 EDN3P14138 238 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 GALNSP34059 522 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 CYB561P49447 251 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ST13P50502 369 aaKnown RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 HLCSP50747 726 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 SPIN4Q56A73 249 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF468Q5VIY5 522 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 FAM26EQ8N5C1 309 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF321PQ8N8H1 164 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 DNAJB8Q8NHS0 232 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 NR4A3Q92570 626 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 FBXL20Q96IG2 436 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 SENP1Q9P0U3 644 aa10.72□□□□□ -0.69
SLIRP-205ENST00000556310 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms