RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 A0A1W2PS29 197 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PLPP1O14494 284 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TRIM3O75382 744 aaPredicted RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MTHFD2P13995 350 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HPDP32754 393 aaPredicted RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DR1Q01658 176 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 IRF8Q02556 426 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RCN2Q14257 317 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CEBPEQ15744 281 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TMEM35AQ53FP2 167 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DEPDC1Q5TB30 811 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MRM1Q6IN84 353 aaKnown RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ISCA2Q86U28 154 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RBBP8Q99708 897 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 POLDIP3Q9BY77 421 aaKnown RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CNOT10Q9H9A5 744 aaKnown RBP13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MED12LQ86YW9 2145 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GABRA1P14867 456 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CPN2P22792 545 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TRPC1P48995 793 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC37A1P57057 533 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MRPS25P82663 173 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLAMF1Q13291 335 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 NTRK2Q16620 822 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TMEM64Q6YI46 380 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 LRRC70Q7Z2Q7 622 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC15A4Q8N697 577 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 UBTD2Q8WUN7 234 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ROGDIQ9GZN7 287 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 WWTR1Q9GZV5 400 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CLEC4MQ9H2X3 399 aaPredicted RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 UBQLN3Q9H347 655 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KCNF1Q9H3M0 494 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 LDAHQ9H6V9 325 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 QPCTLQ9NXS2 382 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ALKBH4Q9NXW9 302 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 NSMCE4AQ9NXX6 385 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CD274Q9NZQ7 290 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 COPS7AQ9UBW8 275 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PLEKHA6Q9Y2H5 1048 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ASB4Q9Y574 426 aa13.18□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TCRBV9S1A1TA0A576 114 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 A6NNC1 897 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TMPRSS11DO60235 418 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CCNT2O60583 730 aaKnown RBP13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EEDO75530 441 aaKnown RBP13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FAM155BO75949 473 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 EPPINO95925 133 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC35E2BP0CK96 405 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TCP1P17987 556 aaKnown RBP13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SSR2P43308 183 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZNF136P52737 540 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GPX6P59796 221 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ATP6V0D1P61421 351 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HERVK_113P63132 956 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ERVK-8P63133 956 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ADAM8P78325 824 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TNFRSF17Q02223 184 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TGM3Q08188 693 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KRTAP1-3Q8IUG1 177 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MMP21Q8N119 569 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZCCHC7Q8N3Z6 543 aaKnown RBP13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ERVK-6Q9BXR3 956 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 DMRT3Q9NQL9 472 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 B4GALT7Q9UBV7 327 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ERVK-19Q9WJR5 959 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SNX24Q9Y343 169 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FN1P02751 2386 aaKnown RBP13.17□□□□□ -0.3
CHMP4BP1-201ENST00000556017 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
CHMP4BP1-201ENST00000556017 A0A1W2PR48 441 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms