RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF304Q9HCX3 659 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 LYRM4Q9HD34 91 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 SLC35C2Q9NQQ7 365 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 LANCL2Q9NS86 450 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 FAM120CQ9NX05 1096 aaKnown RBP10.12□□□□□ -0.79
TDP1-211ENST00000555178 CMTM6Q9NX76 183 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 TRPC4Q9UBN4 977 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 PHF11Q9UIL8 331 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 CROTQ9UKG9 612 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 MAN2B2Q9Y2E5 1009 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 NCOR2Q9Y618 2525 aa10.12□□□□□ -0.79
TDP1-211ENST00000555178 TRBV5-3A0A0A0MS03 114 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 PRSS51A0A1B0GVH4 220 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 DYTNA2CJ06 578 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 A8MUI8 341 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 RNASET2O00584 256 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 NME4O00746 187 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 PDPK1O15530 556 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 KCNH1O95259 989 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 DRD2P14416 443 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NQO1P15559 274 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 TCN1P20061 433 aaPredicted RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 MAOAP21397 527 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 PGM1P36871 562 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ERFP50548 548 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CDK9P50750 372 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 EMP3P54852 163 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 PCBP4P57723 403 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 RAB38P57729 211 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 FOLH1Q04609 750 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CEACAM7Q14002 265 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 TGIF1Q15583 401 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 LTB4RQ15722 352 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 DCAF12Q5T6F0 453 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ARHGAP40Q5TG30 622 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 C16orf89Q6UX73 402 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 HPS6Q86YV9 775 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ZC3H7AQ8IWR0 971 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ANKRD9Q96BM1 317 aaPredicted RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 ROPN1LQ96C74 230 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 FAM122AQ96E09 287 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ITCHQ96J02 903 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CCDC115Q96NT0 180 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CGREF1Q99674 301 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 SLC7A5P2Q9GIP4 190 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 GLIPR2Q9H4G4 154 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 PIF1Q9H611 641 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ATAD3AQ9NVI7 634 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 A0A1W2PRB8 838 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 DLGAP3O95886 979 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 FBLP22087 321 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 F8A1P23610 371 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 SLC5A2P31639 672 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 AVPR1BP47901 424 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 RPS18P62269 152 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 SRSF6Q13247 344 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NANOGP8Q6NSW7 305 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 FAM198BQ6UWH4 519 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CEACAM20Q6UY09 585 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 HACD2Q6Y1H2 254 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 BNC2Q6ZN30 1099 aaPredicted RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 ZNF621Q6ZSS3 439 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ULK2Q8IYT8 1036 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 CCDC116Q8IYX3 515 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ADCY4Q8NFM4 1077 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 TSLPQ969D9 159 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 TMEM125Q96AQ2 219 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 SLC46A1Q96NT5 459 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 SOX17Q9H6I2 414 aaPredicted RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 CXorf36Q9H7Y0 433 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 RMND5AQ9H871 391 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NANOGQ9H9S0 305 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 ASCL3Q9NQ33 180 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NECTIN3Q9NQS3 549 aa10.11□□□□□ -0.79
TDP1-211ENST00000555178 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 WBP11Q9Y2W2 641 aaKnown RBP10.11□□□□□ -0.79
TDP1-211ENST00000555178 A0A096LPI6 279 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 PRORSD1PA6NEY8 169 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 H0YIG0 161 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 TBX19O60806 448 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 CPNE3O75131 537 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 GUCY1B2O75343 617 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 BMP10O95393 424 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ANP32DO95626 131 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 RECKO95980 971 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 RPL3P39023 403 aaKnown RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 FRKP42685 505 aaPredicted RBP10.1□□□□□ -0.79
TDP1-211ENST00000555178 GSTM5P46439 218 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 NCBP2P52298 156 aaKnown RBP eCLIP10.1□□□□□ -0.79
TDP1-211ENST00000555178 ARSFP54793 590 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 ABHD18Q0P651 414 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 DSG2Q14126 1118 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 LRIF1Q5T3J3 769 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 MLIPQ5VWP3 458 aa10.1□□□□□ -0.79
TDP1-211ENST00000555178 FAAH2Q6GMR7 532 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms