RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SENP8Q96LD8 212 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 BTBD9Q96Q07 612 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 POLR3CQ9BUI4 534 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 CRNKL1Q9BZJ0 848 aaKnown RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 NACA2Q9H009 215 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 RPRD1BQ9NQG5 326 aaKnown RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 HPS4Q9NQG7 708 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 ZNF701Q9NV72 531 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 ETNK2Q9NVF9 386 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 TBC1D13Q9NVG8 400 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 BARHL2Q9NY43 387 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 NIP7Q9Y221 180 aaKnown RBP eCLIP4.69□□□□□ -1.66
VRK1-203ENST00000555067 NSG2Q9Y328 171 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 KIF16BQ96L93 1317 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 PIK3R4Q99570 1358 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 LINC00854A0A1B0GVQ3 168 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 HELTA6NFD8 242 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 SDHDO14521 159 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 IGHV4-39P01824 125 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 RAF1P04049 648 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 H1F0P07305 194 aaKnown RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 KRT19P08727 400 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 FCARP24071 287 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 DPP4P27487 766 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 OR1G1P47890 313 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 SLC6A8P48029 635 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 KCNK10P57789 538 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 ISL1P61371 349 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 RPP38P78345 283 aaKnown RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 CX3CL1P78423 397 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 BTG3Q14201 252 aaPredicted RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 PRAMEF20Q5VT98 475 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 OR4A47Q6IF82 309 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 CBLN3Q6UW01 205 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 FAM131BQ86XD5 332 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 CRYBG2Q8N1P7 616 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 ADAD2Q8NCV1 583 aaKnown RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 PPFIBP2Q8ND30 876 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 ZNF248Q8NDW4 579 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 OR52K1Q8NGK4 314 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 SEPT8Q92599 483 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 RAB39BQ96DA2 213 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 OXNAD1Q96HP4 312 aaPredicted RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 DHTKD1Q96HY7 919 aaPredicted RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 RBM41Q96IZ5 413 aaKnown RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 ST6GAL2Q96JF0 529 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 BCL7BQ9BQE9 202 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 LRRC2Q9BYS8 371 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 ZMYND12Q9H0C1 365 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 SDCBP2Q9H190 292 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 TLE6Q9H808 572 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 CFAP45Q9UL16 551 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 CHTOPQ9Y3Y2 248 aaKnown RBP4.68□□□□□ -1.66
VRK1-203ENST00000555067 ZMYM6O95789 1325 aa4.68□□□□□ -1.66
VRK1-203ENST00000555067 CCDC162PA2VCL2 907 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 C15orf62A8K5M9 175 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ZNF197O14709 1029 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ARPC2O15144 300 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ZNHIT1O43257 154 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 SYT7O43581 403 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 RNASEH1O60930 286 aaKnown RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 GRAP2O75791 330 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PDE9AO76083 593 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 UFL1O94874 794 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 MT-ND1P03886 318 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ODC1P11926 461 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ANXA8P13928 327 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 CEBPBP17676 345 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 HNF1AP20823 631 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 CLCN4P51793 760 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 CBX1P83916 185 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 SP3Q02447 781 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PDK3Q15120 406 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 HADHQ16836 314 aaKnown RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 GPAT3Q53EU6 434 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 C20orf194Q5TEA3 1177 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ANXA8L1Q5VT79 327 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 LRRC8BQ6P9F7 803 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 CTR9Q6PD62 1173 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 NANOGNBQ7Z5D8 188 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 LHFPL4Q7Z7J7 247 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PRUNE1Q86TP1 453 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PSTKQ8IV42 348 aaKnown RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 ARL14Q8N4G2 192 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 BBOF1Q8ND07 529 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 OR4L1Q8NH43 312 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 TM9SF4Q92544 642 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PHF21AQ96BD5 680 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 CXorf58Q96LI9 332 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 ZNF354BQ96LW1 612 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 PRICKLE1Q96MT3 831 aaPredicted RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 GANQ9H2C0 597 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 RPAP3Q9H6T3 665 aaPredicted RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 MED20Q9H944 212 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 FN3KRPQ9HA64 309 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 C6orf203Q9P0P8 240 aaPredicted RBP4.67□□□□□ -1.66
VRK1-203ENST00000555067 ERVK-19Q9WJR5 959 aa4.67□□□□□ -1.66
VRK1-203ENST00000555067 IGLV5-45A0A087WSX0 123 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 C5orf60A6NFR6 353 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms