RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ZNF566Q969W8 418 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 TGM7Q96PF1 710 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 ATG10Q9H0Y0 220 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 PLGRKTQ9HBL7 147 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 APC2O95996 2303 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 LOC100130705A0A1B0GUX0 176 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 MAGEB17A8MXT2 336 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 CCDC159P0C7I6 412 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 EEF1B2P24534 225 aaKnown RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 PSMB5P28074 263 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 DOC2AQ14183 400 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 LRRC23Q53EV4 343 aaPredicted RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 SPIN4Q56A73 249 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 OR4F3Q6IEY1 312 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 ZDHHC21Q8IVQ6 265 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 FAM20CQ8IXL6 584 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 WDR48Q8TAF3 677 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 FBLIM1Q8WUP2 373 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 OR2A14Q96R47 310 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 REXO4Q9GZR2 422 aaKnown RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 SPATA7Q9P0W8 599 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 KLHL3Q9UH77 587 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 POMT2Q9UKY4 750 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 WASF3Q9UPY6 502 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 ACACAQ13085 2346 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 CROCCQ5TZA2 2017 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 GSAPA4D1B5 854 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 M0QX08 132 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 ZW10O43264 779 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 MT-CO3P00414 261 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 COX7A2P14406 83 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 PPM1FP49593 454 aaPredicted RBP16.46■□□□□ 0.23
SHOX-204ENST00000554971 WNT3P56703 355 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 KCNAB2Q13303 367 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 ARHGAP19Q14CB8 494 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 UGT8Q16880 541 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 KLHL35Q6PF15 583 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 FAM92BQ6ZTR7 304 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 PIWIL3Q7Z3Z3 882 aaKnown RBP16.46■□□□□ 0.23
SHOX-204ENST00000554971 PLXDC1Q8IUK5 500 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 CHDHQ8NE62 594 aaPredicted RBP16.46■□□□□ 0.23
SHOX-204ENST00000554971 RAB2BQ8WUD1 216 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 WDR34Q96EX3 536 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 ASPSCR1Q9BZE9 553 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 AMBRA1Q9C0C7 1298 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 SOX17Q9H6I2 414 aaPredicted RBP16.46■□□□□ 0.23
SHOX-204ENST00000554971 SMURF2Q9HAU4 748 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 BAG5Q9UL15 447 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 CLCA2Q9UQC9 943 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 PCDHB11Q9Y5F2 797 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 PCDHGA8Q9Y5G5 932 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 KCNE2Q9Y6J6 123 aa16.46■□□□□ 0.23
SHOX-204ENST00000554971 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 PIPSLA2A3N6 862 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 H3BMQ9 156 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 MRPS14O60783 128 aaKnown RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 GSNP06396 782 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 UGT2B7P16662 529 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 KDELR2P33947 212 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CDKN2CP42773 168 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CXCR4P61073 352 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ISL1P61371 349 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CLPPQ16740 277 aaPredicted RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 ISXQ2M1V0 245 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 SNAP47Q5SQN1 464 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ZNF691Q5VV52 312 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 OR2T5Q6IEZ7 315 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 GALNT18Q6P9A2 607 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 EIF3MQ7L2H7 374 aaKnown RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 GPR155Q7Z3F1 870 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 SYTL1Q8IYJ3 562 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 OR2A1Q8NGT9 310 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 OR2T29Q8NH02 315 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 EGLN2Q96KS0 407 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 COG8Q96MW5 612 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 MAP3K3Q99759 626 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 RAB11FIP5Q9BXF6 653 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ACTR10Q9NZ32 417 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ENTPD2Q9Y5L3 495 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 MAGED1Q9Y5V3 778 aaPredicted RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 IGHV5-51A0A0C4DH38 117 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 HS6ST1O60243 411 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 KDM1AO60341 852 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 SEMG1P04279 462 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ELK4P28324 431 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 DNAJA1P31689 397 aaKnown RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 RPL3P39023 403 aaKnown RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 RAB15P59190 212 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 NAE1Q13564 534 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 KEAP1Q14145 624 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 GPR107Q5VW38 600 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CBLL1Q75N03 491 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 DGLUCYQ7Z3D6 616 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 R3HCC1LQ7Z5L2 792 aaKnown RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ZZZ3Q8IYH5 903 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 PIK3C3Q8NEB9 887 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms