RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PCYT1BQ9Y5K3 369 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 LOC390937A0A1W2PQ73 354 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TTC36A6NLP5 189 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CFAP99D6REC4 459 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 B4GAT1O43505 415 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 PLRG1O43660 514 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 NDUFS6O75380 124 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CELF2O95319 508 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM16O95361 564 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CLDN7O95471 211 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 MT-CO1P00395 513 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IGLV3-1P01715 115 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 DNTTP04053 509 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ATP1B1P05026 303 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RPLP0P05388 317 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SERPIND1P05546 499 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ASGR2P07307 311 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 LAMP1P11279 417 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 PABPC1P11940 636 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IL7RP16871 459 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 HLA-GP17693 338 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CPN2P22792 545 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SERPINA4P29622 427 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TGM4P49221 684 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 MTNR1BP49286 362 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 STK19P49842 368 aaPredicted RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RNF144AP50876 292 aaPredicted RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CRISP1P54107 249 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SLC12A2P55011 1212 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 HBA1P69905 142 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ABATP80404 500 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TARDBPQ13148 414 aaKnown RBP eCLIP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 DUSP8Q13202 625 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF141Q15928 474 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IFI44LQ53G44 452 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM61Q5EBN2 209 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 COX20Q5RI15 118 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TPRG1LQ5T0D9 272 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RETSATQ6NUM9 610 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CRTC3Q6UUV7 619 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IL27RAQ6UWB1 636 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF730Q6ZMV8 503 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ADCK2Q7Z695 626 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TSPAN33Q86UF1 283 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 LHFPL3Q86UP9 236 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CDH26Q8IXH8 852 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 GJD3Q8N144 294 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 EID2Q8N6I1 236 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TTC29Q8NA56 475 aaPredicted RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ATAD1Q8NBU5 361 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 FAM46DQ8NEK8 389 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 OR52I1Q8NGK6 324 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 MCOLN3Q8TDD5 553 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 GPR151Q8TDV0 419 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SENP5Q96HI0 755 aaPredicted RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 NIPSNAP1Q9BPW8 284 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 C7orf50Q9BRJ6 194 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 DUSP26Q9BV47 211 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 KRTAP3-3Q9BYR6 98 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 KRTAP3-2Q9BYR7 98 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IRF2BPLQ9H1B7 796 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CXorf36Q9H7Y0 433 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TPT1P8Q9HAU6 139 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 IL1RL2Q9HB29 575 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TAS2R9Q9NYW1 312 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TBC1D14Q9P2M4 693 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 VPS4AQ9UN37 437 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SNPHO15079 494 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 PLOD3O60568 738 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 DKK1O94907 266 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CSPG5O95196 566 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 OR5F1O95221 314 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ANGPTL1O95841 491 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 BCL10O95999 233 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 PTHP01270 115 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 WNT2P09544 360 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 ZGLP1P0C6A0 271 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 LIMS3P0CW19 117 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 LIMS4P0CW20 117 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TFPIP10646 304 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 LYL1P12980 280 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 M6PRP20645 277 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CXCR2P25025 360 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 PSMA1P25786 263 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 STAT5AP42229 794 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 HALP42357 657 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TNFRSF4P43489 277 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 KIR3DL1P43629 444 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 HSPA7P48741 367 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 NUBP1P53384 320 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 RPL6Q02878 288 aaKnown RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 TSPAN31Q12999 210 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CBX3Q13185 183 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SQSTM1Q13501 440 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 GNA13Q14344 377 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 MLF2Q15773 248 aaPredicted RBP3.25□□□□□ -1.89
SEC23A-207ENST00000554615 CSRP2Q16527 193 aa3.25□□□□□ -1.89
SEC23A-207ENST00000554615 SLC5A12Q1EHB4 618 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms