RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ASB1Q9Y576 335 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 MAFBQ9Y5Q3 323 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 COL11A1P12107 1806 aaPredicted RBP9.11□□□□□ -0.95
SIX4-202ENST00000554079 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 PLXNA1Q9UIW2 1896 aa9.11□□□□□ -0.95
SIX4-202ENST00000554079 KLRG2A4D1S0 409 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 SUSD5O60279 629 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 HOXC4P09017 264 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 CBR1P16152 277 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 UGT2B7P16662 529 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SFNP31947 248 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 RNF144AP50876 292 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 CASP6P55212 293 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SLC3A1Q07837 685 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 CACNB2Q08289 660 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 GK2Q14410 553 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 UBXN2BQ14CS0 331 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TSNQ15631 228 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 SV2CQ496J9 727 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ZNF667Q5HYK9 610 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 NOMO2Q5JPE7 1267 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SSX9Q7RTT3 188 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TMEM130Q8N3G9 435 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ATPAF2Q8N5M1 289 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 WDSUB1Q8N9V3 476 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TM9SF4Q92544 642 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 MRPL38Q96DV4 380 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 LCORQ96JN0 433 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 KCTD7Q96MP8 289 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 FEVQ99581 238 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SPATA5L1Q9BVQ7 753 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TMPRSS13Q9BYE2 586 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 FN3KQ9H479 309 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 NXF3Q9H4D5 531 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 TDRD3Q9H7E2 651 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 TMEM184CQ9NVA4 438 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 MED11Q9P086 117 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 AKAP7Q9P0M2 348 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 KLHL42Q9P2K6 505 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SSC5DA1L4H1 1573 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 WNT9AO14904 365 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 RAD1O60671 282 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 RP2O75695 350 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 AKR7A3O95154 331 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 LY86O95711 162 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PAK4O96013 591 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 HLA-DOAP06340 250 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 FOLR2P14207 255 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PPP3CBP16298 524 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 AKT1P31749 480 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 RAG2P55895 527 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 NRG1Q02297 640 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 MAPKAPK3Q16644 382 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 CCDC157Q569K6 752 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 C3orf33Q6P1S2 294 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ALKAL1Q6UXT8 129 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ASB18Q6ZVZ8 466 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PGAP1Q75T13 922 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 LAS2Q8IYD9 372 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ZNF687Q8N1G0 1237 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 SLC44A3Q8N4M1 653 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 OXR1Q8N573 874 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PNPLA1Q8N8W4 532 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ZNF527Q8NB42 609 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ASZ1Q8WWH4 475 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 CPNE4Q96A23 557 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 RFT1Q96AA3 541 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 HSH2DQ96JZ2 352 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 HHIPQ96QV1 700 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 B3GNT5Q9BYG0 378 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ZCCHC2Q9C0B9 1178 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 POLR2J2Q9GZM3 115 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 ELAC1Q9H777 363 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 BARX1Q9HBU1 254 aaPredicted RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PDGFCQ9NRA1 345 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 PIPOXQ9P0Z9 390 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 DHCR7Q9UBM7 475 aaKnown RBP9.1□□□□□ -0.95
SIX4-202ENST00000554079 SIX4Q9UIU6 781 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 POFUT2Q9Y2G5 429 aa9.1□□□□□ -0.95
SIX4-202ENST00000554079 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 PHYHO14832 338 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PPM1DO15297 605 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 LCMT2O60294 686 aaKnown RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 CACNG3O60359 315 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 LILRB5O75023 590 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ICOSLGO75144 302 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 NIPSNAP2O75323 286 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ADH1CP00326 375 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RD3LP0DJH9 198 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 CPEP16870 476 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ZNF8P17098 575 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms