RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 M0R082 166 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SUV39H1O43463 412 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 TRIM13O60858 407 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SPAG7O75391 227 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MYO1DO94832 1006 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ESRRBO95718 433 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SBK3P0C264 359 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 FAM58BPP0C7Q3 252 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MAOAP21397 527 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MAPK12P53778 367 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 NAGLUP54802 743 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 DNAJB13P59910 316 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 BTG2P78543 158 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 CSTF3Q12996 717 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MFAP5Q13361 173 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MEP1AQ16819 746 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 CCNYL2Q5T2Q4 361 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 LRIG3Q6UXM1 1119 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 NLRC3Q7RTR2 1065 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 CLNKQ7Z7G1 428 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 IQCKQ8N0W5 287 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SIRT6Q8N6T7 355 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 HORMAD2Q8N7B1 307 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 BANPQ8N9N5 519 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF417Q8TAU3 575 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 BRIX1Q8TDN6 353 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 TANKQ92844 425 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 PNPLA2Q96AD5 504 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 RBM18Q96H35 190 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ART5Q96L15 291 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 FAM111AQ96PZ2 611 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF587Q96SQ5 575 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 WDR77Q9BQA1 342 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 TRMOQ9BU70 441 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 FAIM2Q9BWQ8 316 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 DEFB126Q9BYW3 111 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 RPF2Q9H7B2 306 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ADAP2Q9NPF8 381 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 RRAGDQ9NQL2 400 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 PFDN4Q9NQP4 134 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 OXSMQ9NWU1 459 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 VPS29Q9UBQ0 182 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ADAM30Q9UKF2 790 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 ADAM29Q9UKF5 820 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 PSME2Q9UL46 239 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 B3GNT3Q9Y2A9 372 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 HEATR5BQ9P2D3 2071 aa7.81□□□□□ -1.16
PSEN1-209ENST00000553855 SMG1Q96Q15 3661 aaKnown RBP7.81□□□□□ -1.16
PSEN1-209ENST00000553855 TCRBV16S1A1N1A0A5B0 115 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 OR2W5A6NFC9 320 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 FOXO6A8MYZ6 492 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 C4orf51C9J302 202 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 G3V2L1 256 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 J3QKU1 62 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 MASP2O00187 686 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 MANBAO00462 879 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 PLPP1O14494 284 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 FCHO1O14526 889 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 OR10H2O60403 315 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 DNAJA2O60884 412 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 DNAJB6O75190 326 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 C1QL1O75973 258 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SCELO95171 688 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 PDYNP01213 254 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 KLK1P06870 262 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 NR2F6P10588 404 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ITGAMP11215 1152 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 CLCN2P51788 898 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SLC26A5P58743 744 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 PLIN5Q00G26 463 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 TNFRSF17Q02223 184 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 OC90Q02509 493 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ACSM2AQ08AH3 577 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 TERF2Q15554 542 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SPDYAQ5MJ70 313 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ACSM2BQ68CK6 577 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 LETMD1Q6P1Q0 360 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 ZNF793Q6ZN11 406 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 FRMD7Q6ZUT3 714 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 RPS27LQ71UM5 84 aaKnown RBP7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SPATC1Q76KD6 591 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 C10orf107Q8IVU9 208 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 TMEM151BQ8IW70 566 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 SCUBE1Q8IWY4 988 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 RNF175Q8N4F7 328 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 B3GNT7Q8NFL0 401 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 TCP10LQ8TDR4 215 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 VMP1Q96GC9 406 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 IMMP1LQ96LU5 166 aa7.8□□□□□ -1.16
PSEN1-209ENST00000553855 DGAT2Q96PD7 388 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms