RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 RYDENQ9NUL5 291 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 ARL15Q9NXU5 204 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 TRMT6Q9UJA5 497 aaKnown RBP8.26□□□□□ -1.09
PRKCH-208ENST00000553846 FBXO5Q9UKT4 447 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 CAMK2AQ9UQM7 478 aa8.26□□□□□ -1.09
PRKCH-208ENST00000553846 A0A096LNT2 108 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 CTAGE9A4FU28 777 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 LRRC14BA6NHZ5 514 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 GOLGA6L22H0YM25 854 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 CBFA2T2O43439 604 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 HCRTR2O43614 444 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 B3GALT2O43825 422 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 CD5LO43866 347 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 FGF17O60258 216 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 IFNA16P05015 189 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 TPM1P09493 284 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 GSTM2P28161 218 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 PTPN6P29350 595 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 STT3AP46977 705 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 BASP1P80723 227 aaKnown RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 FAM27E3Q08E93 113 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 SNX1Q13596 522 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 SERTAD2Q14140 314 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 DHX34Q14147 1143 aaKnown RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 EFTUD2Q15029 972 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 EBPQ15125 230 aaKnown RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 SPA17Q15506 151 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 ZNF474Q6S9Z5 364 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 RAD9BQ6WBX8 426 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 THOC6Q86W42 341 aaKnown RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 GCNT2Q8N0V5 402 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 CCDC89Q8N998 374 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 OR2L5Q8NG80 312 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 SLC22A8Q8TCC7 542 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 WNT2BQ93097 391 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 ZNF669Q96BR6 464 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 PIK3IP1Q96FE7 263 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 RILPQ96NA2 401 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 GNRHR2Q96P88 292 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 SERINC2Q96SA4 455 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 ANGPTL4Q9BY76 406 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 WWTR1Q9GZV5 400 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 KLHL28Q9NXS3 571 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 PACSIN3Q9UKS6 424 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 MRPS33Q9Y291 106 aaKnown RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 EPN1Q9Y6I3 576 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-208ENST00000553846 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
PRKCH-208ENST00000553846 YLPM1P49750 1951 aaKnown RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 A0A1W2PNV4 684 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 OVOL3O00110 214 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 MSTNO14793 375 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TLX2O43763 284 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TMCC2O75069 709 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 CLEC3AO75596 197 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 ACSL3O95573 720 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 IFNA2P01563 188 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 ENO2P09104 434 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 PAMP19021 973 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 RPL21P46778 160 aaKnown RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 SLC6A12P48065 614 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 RGS4P49798 205 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 PLA2G16P53816 162 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 NR1H2P55055 460 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 MTTPP55157 894 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 SLC37A1P57057 533 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 ID2Q02363 134 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 RBBP5Q15291 538 aaKnown RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 SF3B4Q15427 424 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 WIPI1Q5MNZ9 446 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TBCELQ5QJ74 424 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 C4orf22Q6V702 233 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 KIAA1328Q86T90 577 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 LMNTD2Q8IXW0 634 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 MYO1HQ8N1T3 1032 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 FAM13CQ8NE31 585 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 SPPL2AQ8TCT8 520 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 ATL1Q8WXF7 558 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 ABTB1Q969K4 478 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 INTS12Q96CB8 462 aaKnown RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TMEM41AQ96HV5 264 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 JSRP1Q96MG2 331 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-208ENST00000553846 MAPKAP1Q9BPZ7 522 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 TMEM204Q9BSN7 226 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 CCDC68Q9H2F9 335 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 NT5DC2Q9H857 520 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 COPS7AQ9UBW8 275 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 NDRG3Q9UGV2 375 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 SLC22A14Q9Y267 594 aa8.24□□□□□ -1.09
PRKCH-208ENST00000553846 CASKO14936 926 aa8.23□□□□□ -1.09
PRKCH-208ENST00000553846 KLF4O43474 513 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms