RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 GPR180Q86V85 440 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SFTPA2Q8IWL1 248 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C10orf67Q8IYJ2 551 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SAMD14Q8IZD0 417 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ZCCHC7Q8N3Z6 543 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 LIX1Q8N485 282 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 DNAJC22Q8N4W6 341 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C1orf52Q8N6N3 182 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ANKRD53Q8N9V6 530 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF740Q8NDX6 193 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 OR2T11Q8NH01 316 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PROKR1Q8TCW9 393 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CREB3L4Q8TEY5 395 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ZBTB8AQ96BR9 441 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TESCQ96BS2 214 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ROPN1LQ96C74 230 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 MS4A6EQ96DS6 147 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 APIPQ96GX9 242 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 FCRL1Q96LA6 429 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TGM7Q96PF1 710 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 RAB3IPQ96QF0 476 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 OR2A5Q96R48 311 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 F2RL3Q96RI0 385 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SERINC2Q96SA4 455 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SH3GL1Q99961 368 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 HOPXQ9BPY8 73 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C1orf50Q9BV19 199 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 NPLQ9BXD5 320 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SLC7A5P2Q9GIP4 190 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 OR51B5Q9H339 312 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 DDX31Q9H8H2 851 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ANKHQ9HCJ1 492 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 IRAK4Q9NWZ3 460 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 LYARQ9NX58 379 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CCDC167Q9P0B6 97 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PDP2Q9P2J9 529 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PCDHGB4Q9UN71 923 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CDC14AQ9UNH5 594 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SH2B3Q9UQQ2 575 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 AP3M1Q9Y2T2 418 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 POLR3HQ9Y535 204 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SNRNP200O75643 2136 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PCDH15Q96QU1 1955 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MN1Q10571 1320 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 A0A1W2PP18 115 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 LNP1A1A4G5 178 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C1orf226A1L170 272 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SH3D21A4FU49 640 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SYNDIG1LA6NDD5 238 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ERICH4A6NGS2 130 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 A8MU76 341 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C22orf46C9J442 243 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NTN3O00634 580 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CLDN4O14493 209 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CDX4O14627 284 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SMAD7O15105 426 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 GYG2O15488 501 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ERI3O43414 337 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 KIF1CO43896 1103 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 TBX19O60806 448 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CTSVO60911 334 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SH3BGRLO75368 114 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 UNC5CO95185 931 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 STAMBPO95630 424 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 EIF2S1P05198 315 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 RPLP0P05388 317 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 THBDP07204 575 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CD63P08962 238 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ALDOCP09972 364 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SMIM10L1P0DMW3 83 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 COX7A2P14406 83 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PVRP15151 417 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ALOX12P18054 663 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NELFEP18615 380 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 IL10P22301 178 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 HIST1H1TP22492 207 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 JAK1P23458 1154 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 BSGP35613 385 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 TRPC1P48995 793 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PLA2G16P53816 162 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 DIO3P55073 304 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 VSX2P58304 361 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C21orf58P58505 322 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 UFM1P61960 85 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CYP4F2P78329 520 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 BTN3A2P78410 334 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CYP4F3Q08477 520 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CCDC6Q16204 474 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MAPKAPK3Q16644 382 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 DNAL1Q4LDG9 190 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CPTPQ5TA50 214 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C6orf163Q5TEZ5 329 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NKAIN2Q5VXU1 208 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PRMT9Q6P2P2 845 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 GUSBP11Q6P575 273 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ABHD17CQ6PCB6 329 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C6orf15Q6UXA7 325 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 HACD2Q6Y1H2 254 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 COMMD6Q7Z4G1 85 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms