RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SUSD5O60279 629 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TSPAN15O95858 294 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CD53P19397 219 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TPSB2P20231 275 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CCND1P24385 295 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TACR1P25103 407 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ADSLP30566 484 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 UQCRC1P31930 480 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 GRK3P35626 688 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SLC1A2P43004 574 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ASCL1P50553 236 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CCR8P51685 355 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 HNRNPFP52597 415 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 DCAF7P61962 342 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 BASP1P80723 227 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 REEP5Q00765 189 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SP140Q13342 867 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CTBP1Q13363 440 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 NAE1Q13564 534 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SNX1Q13596 522 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TPSAB1Q15661 275 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ARMC3Q5W041 872 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 NEPROQ6NW34 567 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 IL20RBQ6UXL0 311 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 RAD9BQ6WBX8 426 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ABHD13Q7L211 337 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CXXC5Q7LFL8 322 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SLC13A5Q86YT5 568 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CCDC89Q8N998 374 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ANKRD53Q8N9V6 530 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 OR56A3Q8NH54 315 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 GOT1L1Q8NHS2 421 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ASB15Q8WXK1 588 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 RNASE6Q93091 150 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SCYL1Q96KG9 808 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 FAM173AQ9BQD7 235 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF703Q9H7S9 590 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 LIN28AQ9H9Z2 209 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 CLK4Q9HAZ1 481 aaKnown RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 IL1RL2Q9HB29 575 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 SEMA4BQ9NPR2 832 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 FBXO6Q9NRD1 293 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 TUBA8Q9NY65 449 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-219ENST00000553488 MYOTQ9UBF9 498 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 EDARQ9UNE0 448 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ERVK-11Q9UQG0 969 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ATG4BQ9Y4P1 393 aa6.71□□□□□ -1.34
ATXN3-219ENST00000553488 ABCA1O95477 2261 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ZCWPW2A0A1B0GU75 182 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 LRRC3CA6NJW4 275 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 DBX1A6NMT0 343 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 FAM47E-STBD1D6RA91 191 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 AP3B1O00203 1094 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 PSMD12O00232 456 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 OR1F1O43749 312 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 HCN1O60741 890 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 AVILO75366 819 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ZFAND5O76080 213 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 LY6G6DO95868 133 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 C8GP07360 202 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 CCL3P10147 92 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 GABRA1P14867 456 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 CD247P20963 164 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 CEACAM8P31997 349 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 AHRP35869 848 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ANP32AP39687 249 aaKnown RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 DNASE1L1P49184 302 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 MAN2A2P49641 1150 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 RAB8AP61006 207 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 RGS1Q08116 209 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 KEAP1Q14145 624 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 KCTD19Q17RG1 926 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF750Q32MQ0 723 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 CATSPEREQ5SY80 951 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 SEL1L2Q5TEA6 688 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 LRRC8EQ6NSJ5 796 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 DRICH1Q6PGQ1 229 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 RTL4Q6ZR62 310 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ULK2Q8IYT8 1036 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 SYCE1Q8N0S2 351 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 CIARTQ8N365 385 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 NEIL2Q969S2 332 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 SARAFQ96BY9 339 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 PYCR2Q96C36 320 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 HAUS8Q9BT25 410 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 RHBGQ9H310 441 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 KLHL31Q9H511 634 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 PARVBQ9HBI1 364 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 GP6Q9HCN6 339 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 SH2D2AQ9NP31 389 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ADAP2Q9NPF8 381 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 PNO1Q9NRX1 252 aaKnown RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 BEX4Q9NWD9 120 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ERVK13-1Q9NX77 482 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ADAM21Q9UKJ8 722 aa6.7□□□□□ -1.34
ATXN3-219ENST00000553488 ACAD8Q9UKU7 415 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms