RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PRR20DP86480 221 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 PRR20BP86481 221 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 PRR20AP86496 221 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 PLIN5Q00G26 463 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 FOLH1Q04609 750 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ASPHQ12797 758 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CALCOCO2Q13137 446 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CHIT1Q13231 466 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 DOC2AQ14183 400 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 SLC25A35Q3KQZ1 300 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 C6orf163Q5TEZ5 329 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ABHD17CQ6PCB6 329 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CHSY3Q70JA7 882 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 TRILQ7L0X0 811 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 SLC29A4Q7RTT9 530 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 LRRC70Q7Z2Q7 622 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CTAGE3PQ8IX95 158 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 DMRTC2Q8IXT2 367 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ZZZ3Q8IYH5 903 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 SPATA6LQ8N4H0 392 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 TMEM251Q8N6I4 163 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 PYROXD1Q8WU10 500 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ANKRD49Q8WVL7 239 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 RBM18Q96H35 190 aaKnown RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 QRFPRQ96P65 431 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 TBCDQ9BTW9 1192 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CNPPD1Q9BV87 410 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 POLDIP3Q9BY77 421 aaKnown RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 AICDAQ9GZX7 198 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 NT5DC2Q9H857 520 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ZDHHC11Q9H8X9 412 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 CAB39LQ9H9S4 337 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 TRMT1Q9NXH9 659 aaKnown RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.17□□□□□ -0.94
ACTN1-208ENST00000553370 ARID1AO14497 2285 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 MED12LQ86YW9 2145 aa9.17□□□□□ -0.94
ACTN1-208ENST00000553370 C15orf38-AP3S2A0A0A6YYH1 394 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SAP18O00422 153 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 RTCAO00442 366 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 CYR61O00622 381 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 AQP7O14520 342 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SEC31AO94979 1220 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 CCL3P10147 92 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 GABRA1P14867 456 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 IGFBP2P18065 325 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 GDF1P27539 372 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SERPINB1P30740 379 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 TBL3Q12788 808 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 FRG1Q14331 258 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 FASTKD3Q14CZ7 662 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 TMEM35AQ53FP2 167 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 EMC4Q5J8M3 183 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 PRAMEF20Q5VT98 475 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SLC22A10Q63ZE4 541 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 ADNP2Q6IQ32 1131 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 MED27Q6P2C8 311 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 TBC1D1Q86TI0 1168 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 GALNT12Q8IXK2 581 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 ZNF321PQ8N8H1 164 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 ACOT4Q8N9L9 421 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 BBOF1Q8ND07 529 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 OR8K3Q8NH51 312 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 GOT1L1Q8NHS2 421 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 PTPMT1Q8WUK0 201 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 CMTM7Q96FZ5 175 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 MAPKAP1Q9BPZ7 522 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 TTYH2Q9BSA4 534 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 WDR41Q9HAD4 459 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SRA1Q9HD15 236 aaKnown RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 SAYSD1Q9NPB0 183 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 TUBA8Q9NY65 449 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-208ENST00000553370 OPTCQ9UBM4 332 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 PHF11Q9UIL8 331 aa9.16□□□□□ -0.94
ACTN1-208ENST00000553370 A0A0G2JNJ9 132 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 CCDC188H7C350 402 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 DVL2O14641 736 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 EREGO14944 169 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 KLK8O60259 260 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 SUSD5O60279 629 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 HCN1O60741 890 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 PIAS1O75925 651 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 LRATO95237 230 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 TGFB1P01137 390 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 CELA3AP09093 270 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 GLI4P10075 376 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 CD99P14209 185 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 HIST1H1TP22492 207 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-208ENST00000553370 DNASE1P24855 282 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 ATP5A1P25705 553 aaKnown RBP9.15□□□□□ -0.94
ACTN1-208ENST00000553370 PIGAP37287 484 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 BUD31P41223 144 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-208ENST00000553370 KIR2DL3P43628 341 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
ACTN1-208ENST00000553370 STT3AP46977 705 aa9.15□□□□□ -0.94
ACTN1-208ENST00000553370 MASP1P48740 699 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms