RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 OR51I1Q9H343 314 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 NEUROD4Q9HD90 331 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 KIF17Q9P2E2 1029 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 COLQQ9Y215 455 aaPredicted RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 IGHV1OR15-9A0A0B4J2B8 117 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 A0A1W2PPC4 97 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 OR2A25A4D2G3 310 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 RECKO95980 971 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 POU2F1P14859 743 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 ID2Q02363 134 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 LASP1Q14847 261 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 KCTD21Q4G0X4 260 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 TTC23Q5W5X9 447 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 PIWIL3Q7Z3Z3 882 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 RBM45Q8IUH3 476 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 OR9A2Q8NGT5 310 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 UTP15Q8TED0 518 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 RSC1A1Q92681 617 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 DGCR14Q96DF8 476 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 KLHDC7BQ96G42 594 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 SARGQ9BW04 601 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 MIR1-1HGQ9H1L0 117 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 LIN28AQ9H9Z2 209 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 WBP11Q9Y2W2 641 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 ORC6Q9Y5N6 252 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 KCNE3Q9Y6H6 103 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 C10orf142B7Z368 130 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 TBX19O60806 448 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 WNT1P04628 370 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 CLK3P49761 638 aaKnown RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 STXBP1P61764 594 aaKnown RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SPIBQ01892 262 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 PUM1Q14671 1186 aaKnown RBP eCLIP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 KIR2DS3Q14952 304 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SMAD2Q15796 467 aaKnown RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 CRB2Q5IJ48 1285 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 KDM4DQ6B0I6 523 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 PIK3C3Q8NEB9 887 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 CSF3RQ99062 836 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 RBM38Q9H0Z9 239 aaKnown RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 TAS2R7Q9NYW3 318 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 CES1P1Q9UKY3 287 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 ANGPT4Q9Y264 503 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 PADI2Q9Y2J8 665 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SMIM31A0A1B0GVY4 71 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 TNFRSF11BO00300 401 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 JUNDP17535 347 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 CCR5P51681 352 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 RPS15AP62244 130 aaKnown RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SIM1P81133 766 aaPredicted RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 NEDD8Q15843 81 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 DEFB110Q30KQ9 67 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 LRIT3Q3SXY7 679 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 PTCRAQ6ISU1 281 aaPredicted RBP19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SLC22A18Q96BI1 424 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 GSDMCQ9BYG8 508 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 SLC24A3Q9HC58 644 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 LYVE1Q9Y5Y7 322 aa19.79■□□□□ 0.76
PRDM4-205ENST00000550376 A0A087WXM4 84 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 PTGES3LE9PB15 166 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 BCKDKO14874 412 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 SLC28A2O43868 658 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 IGLV3-19P01714 112 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 MAZP56270 477 aaKnown RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 ISL1P61371 349 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 TRA2BP62995 288 aaKnown RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 IL5RAQ01344 420 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 CHDHQ8NE62 594 aaPredicted RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 LZICQ8WZA0 190 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 ZNF300Q96RE9 604 aaPredicted RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 FEVQ99581 238 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 KRT84Q9NSB2 600 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 ACSS1Q9NUB1 689 aaPredicted RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 ANKMY1Q9P2S6 941 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 CEPT1Q9Y6K0 416 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 FAM227AF5H4B4 570 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 HMGN2P05204 90 aaKnown RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 MATN1P21941 496 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 NTSP30990 170 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 RAD23AP54725 363 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 SLC48A1Q6P1K1 146 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 CCDC80Q76M96 950 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 COMTD1Q86VU5 262 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 VANGL1Q8TAA9 524 aaPredicted RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 LRRC61Q9BV99 259 aa19.78■□□□□ 0.76
PRDM4-205ENST00000550376 QRSL1Q9H0R6 528 aaKnown RBP19.78■□□□□ 0.76
PRDM4-205ENST00000550376 H0YGG7 62 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 STK25O00506 426 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 PCDH17O14917 1159 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 XPNPEP2O43895 674 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 SLC35G6P0C7Q6 338 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 MC3RP41968 323 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 ALDH3B2P48448 385 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 ARF3P61204 181 aaPredicted RBP19.77■□□□□ 0.76
PRDM4-205ENST00000550376 UBE2IP63279 158 aaKnown RBP19.77■□□□□ 0.76
PRDM4-205ENST00000550376 HHEXQ03014 270 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 PMS2P3Q13401 168 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 RUNX2Q13950 521 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 EXOC3L2Q2M3D2 409 aa19.77■□□□□ 0.76
PRDM4-205ENST00000550376 SLC5A8Q8N695 610 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms