RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	EGLN2	Q96KS0	407 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	SORT1	Q99523	831 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	IQCG	Q9H095	443 aa	Known RBP	10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	ANKRA2	Q9H9E1	313 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	ADAP2	Q9NPF8	381 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	PHF11	Q9UIL8	331 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	ADAM29	Q9UKF5	820 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	ADAM21	Q9UKJ8	722 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	POLR3H	Q9Y535	204 aa	Predicted RBP	10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	PCDHGB7	Q9Y5F8	929 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	PCDHGA10	Q9Y5H3	936 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	PCDHA9	Q9Y5H5	950 aa		10.44	□□□□□ -0.74
RAB5B-208	ENST00000550283	C17orf105	B2RV13	164 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	CLDN4	O14493	209 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	AZIN1	O14977	448 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	PIP5K1B	O14986	540 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	PCDH7	O60245	1069 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	NPHS1	O60500	1241 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	DPM1	O60762	260 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	GPR75	O95800	540 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	IGKV3-11	P04433	115 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	IL3	P08700	152 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	UROS	P10746	265 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	HSD3B1	P14060	373 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	HSD3B2	P26439	372 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TIA1	P31483	386 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	CD96	P40200	585 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	STT3A	P46977	705 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TNFSF10	P50591	281 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TAS2R50	P59544	299 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	PMP22	Q01453	160 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	MGAT2	Q10469	447 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	STX4	Q12846	297 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TUBA3C	Q13748	450 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	INPP5J	Q15735	1006 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	CHI3L2	Q15782	390 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SLC48A1	Q6P1K1	146 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TUBA3E	Q6PEY2	450 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	FAM111B	Q6SJ93	734 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	C9orf40	Q8IXQ3	194 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SLC2A12	Q8TD20	617 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	MGARP	Q8TDB4	240 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	PNPLA2	Q96AD5	504 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SNRNP40	Q96DI7	357 aa	Known RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	CNRIP1	Q96F85	164 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	ZNF681	Q96N22	645 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TAAR6	Q96RI8	345 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	LMF1	Q96S06	567 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	CENPK	Q9BS16	269 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	OR8D2	Q9GZM6	311 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SSU72	Q9NP77	194 aa	Known RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	KCNK9	Q9NPC2	374 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	STMN3	Q9NZ72	180 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SENP1	Q9P0U3	644 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	ANAPC2	Q9UJX6	822 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	MRPS33	Q9Y291	106 aa	Known RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	B3GNT3	Q9Y2A9	372 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	TRAF6	Q9Y4K3	522 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	SHANK1	Q9Y566	2161 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	NBAS	A2RRP1	2371 aa		10.43	□□□□□ -0.74
RAB5B-208	ENST00000550283	FLNC	Q14315	2725 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	MYO18B	Q8IUG5	2567 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	TMEM120B	A0PK00	339 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	NEURL1	O76050	574 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ALPP	P05187	535 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	MYZAP	P0CAP1	466 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ALOX15	P16050	662 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	S1PR1	P21453	382 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	SSTR4	P31391	388 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	FEN1	P39748	380 aa	Known RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	BUD31	P41223	144 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	UQCRFS1	P47985	274 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	NR0B1	P51843	470 aa	Known RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	MLF1	P58340	268 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ERVK-8	P63133	956 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	FOXK1	P85037	733 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	RFTN2	Q52LD8	501 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	SH2D4B	Q5SQS7	431 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	C10orf62	Q5T681	223 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	SPINK14	Q6IE38	97 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	OR52E8	Q6IFG1	317 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	GALNT18	Q6P9A2	607 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	RPS19BP1	Q86WX3	136 aa	Known RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	NUDCD3	Q8IVD9	361 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	CNPY4	Q8N129	248 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ARMC10	Q8N2F6	343 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ZADH2	Q8N4Q0	377 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ZNF781	Q8N8C0	355 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	GBP7	Q8N8V2	638 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	MDS2	Q8NDY4	140 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	ADCY4	Q8NFM4	1077 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	OR1N1	Q8NGS0	311 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	TWIST2	Q8WVJ9	160 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	HAS2	Q92819	552 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	TANK	Q92844	425 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	MIB2	Q96AX9	1013 aa		10.42	□□□□□ -0.74
RAB5B-208	ENST00000550283	SENP5	Q96HI0	755 aa	Predicted RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms