RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 RCN2Q14257 317 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
GCN1-204ENST00000548132 HIST2H2ACQ16777 129 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 HIST2H2AA3Q6FI13 130 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 TMEM251Q8N6I4 163 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 NUBPLQ8TB37 319 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 PPWD1Q96BP3 646 aaKnown RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 FMO2Q99518 471 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 VKORC1Q9BQB6 163 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 VPS11Q9H270 941 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 RPF2Q9H7B2 306 aaKnown RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 ZNF703Q9H7S9 590 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 DDX31Q9H8H2 851 aaKnown RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 IPPKQ9H8X2 491 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 ACTR8Q9H981 624 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 TUBA8Q9NY65 449 aaPredicted RBP11.5□□□□□ -0.57
GCN1-204ENST00000548132 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
GCN1-204ENST00000548132 GLOD5A6NK44 160 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 A8MT66 165 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 STX16-NPEPL1H3BU86 382 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 PPP6CO00743 305 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 STX16O14662 325 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.57
GCN1-204ENST00000548132 URI1O94763 535 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 SEMA3DO95025 777 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 IGHG3P01860 377 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 GBAP04062 536 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 TPOP07202 933 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 SNRPB2P08579 225 aaKnown RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 CT62P0C5K7 136 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ALOX15P16050 662 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 TYK2P29597 1187 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 PTGS2P35354 604 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 PTGER4P35408 488 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 MAGEA5P43359 124 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 RAP1GDS1P52306 607 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 SLC37A1P57057 533 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 HERVK_113P63132 956 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ERVK-8P63133 956 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ASPHQ12797 758 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 DUSP8Q13202 625 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 CUL3Q13618 768 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 MPEG1Q2M385 716 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 GGTA1PQ4G0N0 100 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 LETMD1Q6P1Q0 360 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 METTL2BQ6P1Q9 378 aaKnown RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 XKRXQ6PP77 449 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 RTL4Q6ZR62 310 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 CHSY3Q70JA7 882 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 GPR180Q86V85 440 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 SRRM1Q8IYB3 904 aaKnown RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 MMP21Q8N119 569 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 GOLM1Q8NBJ4 401 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ZNF483Q8TF39 744 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 RGMAQ96B86 450 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 ERVK-6Q9BXR3 956 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 WWTR1Q9GZV5 400 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 EPB41L4BQ9H329 900 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 NOL11Q9H8H0 719 aaKnown RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 LYARQ9NX58 379 aaKnown RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 ADGRE2Q9UHX3 823 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ERVK-11Q9UQG0 969 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 ERVK-19Q9WJR5 959 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
GCN1-204ENST00000548132 CHCHD2Q9Y6H1 151 aaPredicted RBP11.49□□□□□ -0.57
GCN1-204ENST00000548132 DOCK7Q96N67 2140 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 ZNF469Q96JG9 3925 aaPredicted RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 NF1P21359 2839 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 FOXE1O00358 373 aaPredicted RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 LRATO95237 230 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 FAM58BPP0C7Q3 252 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 PHBP35232 272 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 CASP6P55212 293 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 KRTAP10-9P60411 292 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 DUSP2Q05923 314 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 GALNT1Q10472 559 aaPredicted RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 HYAL4Q2M3T9 481 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 PIGGQ5H8A4 983 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 TCHHL1Q5QJ38 904 aaPredicted RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 RTL6Q6ICC9 239 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 OR52E8Q6IFG1 317 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 LRRN4CLQ8ND94 238 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 UHMK1Q8TAS1 419 aaKnown RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 NTNG2Q96CW9 530 aa11.48□□□□□ -0.57
GCN1-204ENST00000548132 MTFMTQ96DP5 389 aaKnown RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 SPACA9Q96E40 222 aaPredicted RBP11.48□□□□□ -0.57
GCN1-204ENST00000548132 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms