RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PLEKHS1Q5SXH7 462 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FIGLAQ6QHK4 219 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ENPP6Q6UWR7 440 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ZYG11AQ6WRX3 759 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 BHLHA9Q7RTU4 235 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PNLDC1Q8NA58 520 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 OR56A1Q8NGH5 318 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 S100ZQ8WXG8 99 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 RFKQ969G6 155 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GAL3ST1Q99999 423 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 LRIT1Q9P2V4 623 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 A0A075B6Q4 140 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PRKD3O94806 890 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GBAP04062 536 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 IRF2P14316 349 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 HOXD9P28356 352 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PIK3CBP42338 1070 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 DGKQP52824 942 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 SLC18A2Q05940 514 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 SEMA3BQ13214 749 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 TUBB3Q13509 450 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PTPRRQ15256 657 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 BCL2A1Q16548 175 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 KIAA1211LQ6NV74 962 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ESX1Q8N693 406 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GATSQ8NAP1 163 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PROKR2Q8NFJ6 384 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 OR5AK3PQ8NH89 298 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 NKD1Q969G9 470 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FCRL3Q96P31 734 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CDK15Q96Q40 435 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 BHLHE41Q9C0J9 482 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 NAA50Q9GZZ1 169 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PDP1Q9P0J1 537 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 SSR3Q9UNL2 185 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 DLGAP4Q9Y2H0 992 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PLLPQ9Y342 182 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FAM186AA6NE01 2351 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FAM149AA5PLN7 773 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 H3BMQ9 156 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 TP73O15350 636 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FADS2O95864 444 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 SRCP12931 536 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 IL1RNP18510 177 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GMPRP36959 345 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CAPGP40121 348 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 P2RY2P41231 377 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 HERC3Q15034 1050 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 DUSP6Q16828 381 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GTF2IRD2BQ6EKJ0 949 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GK5Q6ZS86 529 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GTF2IRD2Q86UP8 949 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 AMER2Q8N7J2 671 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 OR5H6Q8NGV6 325 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ARRDC3Q96B67 414 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 COG8Q96MW5 612 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 SFXN2Q96NB2 322 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 NPAS2Q99743 824 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 WDR81Q562E7 1941 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 NCOR1O75376 2440 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 hCG_1807616A0A1W2PRN6 198 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 BLOC1S5-TXNDC5H3BN57 136 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ZDHHC11BP0C7U3 371 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RPS13P62277 151 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RACK1P63244 317 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ARF5P84085 180 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 RAB39AQ14964 217 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TAZQ16635 292 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DCAF12Q5T6F0 453 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 LILRA6Q6PI73 481 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ADGRD1Q6QNK2 874 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ABRAXAS1Q6UWZ7 409 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 HSDL2Q6YN16 418 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF676Q8N7Q3 588 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 OR10H4Q8NGA5 316 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 OR10A6Q8NH74 314 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TBC1D15Q8TC07 691 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 PEX11GQ96HA9 241 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 IL17FQ96PD4 163 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 APOOQ9BUR5 198 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ACTR3BQ9P1U1 418 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 GALPQ9UBC7 116 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TESMINQ9Y4I5 508 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 AHCTF1Q8WYP5 2266 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ECI2O75521 394 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 KHDRBS3O75525 346 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SIX3O95343 332 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 FABP3P05413 133 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DNAJA1P31689 397 aaKnown RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 OPRL1P41146 370 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF84P51523 738 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 DSTNP60981 165 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 POU6F2P78424 691 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-218ENST00000545889 SP140Q13342 867 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 TAB1Q15750 504 aa8.22□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF648Q5T619 568 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms