RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GAS8O95995 478 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 CASP9P55211 416 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 TOR1AIP1Q5JTV8 583 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 LIPNQ5VXI9 398 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 PPP1R21Q6ZMI0 780 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 PIWIL4Q7Z3Z4 852 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ADGRE4PQ86SQ3 457 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 CAND1Q86VP6 1230 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ANKRD53Q8N9V6 530 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ZNF721Q8TF20 911 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 PYCR2Q96C36 320 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ZNF597Q96LX8 424 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 ALOXE3Q9BYJ1 711 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 LIPT1Q9Y234 373 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 FREM1Q5H8C1 2179 aa13.97□□□□□ -0.17
CLSTN3-216ENST00000545663 A0A0G2JK05 382 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 TGM6O95932 706 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 POU2F1P14859 743 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 ARNTP27540 789 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 NMBRP28336 390 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 CASQ1P31415 396 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 SCTRP47872 440 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 GAB1Q13480 694 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 HIST2H2BDQ6DRA6 164 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 TMEM64Q6YI46 380 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 MPP5Q8N3R9 675 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 CNEP1R1Q8N9A8 125 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 OR14A16Q8NHC5 309 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 LILRB1Q8NHL6 650 aaPredicted RBP13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 ATL1Q8WXF7 558 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 GTPBP3Q969Y2 492 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 PGM2Q96G03 612 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 TNFRSF13CQ96RJ3 184 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 CSF3RQ99062 836 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 VTI1BQ9UEU0 232 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 ADAMTS6Q9UKP5 1117 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 SAR1BQ9Y6B6 198 aa13.96□□□□□ -0.17
CLSTN3-216ENST00000545663 ALPK2Q86TB3 2170 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 FAM234BA2RU67 622 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 FRG2CA6NGY1 282 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 E5RI56 91 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 H0Y3Z8 333 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 H3BMM5 538 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 HRKO00198 91 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 ESR1P03372 595 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 THBS1P07996 1170 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 FBXO45P0C2W1 286 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 CPN1P15169 458 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 ZNF16P17020 682 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 IGFBP5P24593 272 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 DPP4P27487 766 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 MTTPP55157 894 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 DEFA6Q01524 100 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 ID2Q02363 134 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 KLF1Q13351 362 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 ACTRT1Q8TDG2 376 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 DOK4Q8TEW6 326 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 DIO2Q92813 273 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 PLPPR2Q96GM1 343 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 OSBPL9Q96SU4 736 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 TMEM204Q9BSN7 226 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 CLCF1Q9UBD9 225 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 MAPRE3Q9UPY8 281 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 MED16Q9Y2X0 877 aa13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 MAGED1Q9Y5V3 778 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-216ENST00000545663 SLC35F4A4IF30 521 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 SERINC4A6NH21 518 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 CYR61O00622 381 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 UBFD1O14562 309 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 FGGP02679 453 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 MPC1LP0DKB6 136 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 SAT1P21673 171 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 PAFAH1B1P43034 410 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 KCNJ5P48544 419 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 PCYT1AP49585 367 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 STARP49675 285 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 RAB38P57729 211 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 VLDLRP98155 873 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 TBL3Q12788 808 aaKnown RBP13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 FAM120AOSQ5T036 256 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 ZNF595Q8IYB9 648 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 SGMS2Q8NHU3 365 aa13.94□□□□□ -0.18
CLSTN3-216ENST00000545663 RAB3IL1Q8TBN0 382 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms