RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FBXL4Q9UKA2 621 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 PILRAQ9UKJ1 303 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 EXOC7Q9UPT5 735 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 AP1M2Q9Y6Q5 423 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 COLEC10Q9Y6Z7 277 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 GREB1LQ9C091 1923 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF609O15014 1411 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 COL4A5P29400 1685 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 MYO9BQ13459 2157 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SMCHD1A6NHR9 2005 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SERINC4A6NH21 518 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ADAM12O43184 909 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SYT7O43581 403 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 CLN5O75503 358 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 AKR7A3O95154 331 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 DIRAS3O95661 229 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 CPNE6O95741 557 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 EPOP01588 193 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ZCCHC18P0CG32 403 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 T-ENOLP0DO92 83 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ARF4P18085 180 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 PRDX6P30041 224 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 CEACAM8P31997 349 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 NSFP46459 744 aaKnown RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 HERV-K104P61576 105 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 MYL7Q01449 175 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SPP2Q13103 211 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 GPR50Q13585 617 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 DPYSQ14117 519 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TRIM29Q14134 588 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 KRT31Q15323 416 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SPHARQ15513 63 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF776Q68DI1 518 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 NADSYN1Q6IA69 706 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM207Q6UWW9 146 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 C18orf65Q6ZTR6 163 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SLC24A5Q71RS6 500 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF771Q7L3S4 317 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 G2E3Q7L622 706 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 SYVN1Q86TM6 617 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 METTL27Q8N6F8 245 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 POC1AQ8NBT0 407 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 IPMKQ8NFU5 416 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 OR1L3Q8NH93 324 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 HPSE2Q8WWQ2 592 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM143Q96AN5 459 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 MRPL53Q96EL3 112 aaKnown RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 C14orf79Q96F83 325 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 DUX5Q96PT3 197 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TAAR6Q96RI8 345 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 DEFB129Q9H1M3 183 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 BICC1Q9H694 974 aaKnown RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 DCLRE1BQ9H816 532 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TBC1D13Q9NVG8 400 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 FLRT3Q9NZU0 649 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 TAAR2Q9P1P5 351 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 C19orf25Q9UFG5 118 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-222ENST00000545308 MAN1B1Q9UKM7 699 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 PPP2R2CQ9Y2T4 447 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 ETV7Q9Y603 341 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 MGAMO43451 1857 aa3.62□□□□□ -1.83
SNHG1-222ENST00000545308 LAMB2P55268 1798 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 TRBV4-1A0A0J9YWV2 114 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 ATP6AP2A0A1C7CYW4 349 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM89A2RUT3 159 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CYSRT1A8MQ03 144 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 A8MVM7 634 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 TEX28O15482 410 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SSX5O60225 188 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 UFL1O94874 794 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 IGHV4-59P01825 116 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 FAM200BP0CF97 657 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CCL5P13501 91 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CEACAM1P13688 526 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CCND2P30279 289 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 ACAA2P42765 397 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 MAGEA11P43364 429 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SLC6A12P48065 614 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 HERV-K104P63124 156 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 IRX4P78413 519 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 ITGA9Q13797 1035 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CEACAM7Q14002 265 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 KEAP1Q14145 624 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CCDC152Q4G0S7 254 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 FASTKD1Q53R41 847 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 LCN1P1Q5VSP4 162 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 RAET1GQ6H3X3 334 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 IRGCQ6NXR0 463 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SLC27A4Q6P1M0 643 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CEACAM20Q6UY09 585 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms