RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	COMMD8	Q9NX08	183 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	MRTO4	Q9UKD2	239 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	TSPAN16	Q9UKR8	245 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	MMP24	Q9Y5R2	645 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SNX5	Q9Y5X3	404 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	RPL37AP8	A6NKH3	93 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	GALR3	O60755	368 aa	Predicted RBP	3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	GMNN	O75496	209 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	PNP	P00491	289 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	SFTPB	P07988	381 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	FER	P16591	822 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	ARF5	P84085	180 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZFP36L1	Q07352	338 aa	Known RBP	3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	HFE	Q30201	348 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	MPPE1	Q53F39	396 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	EMB	Q6PCB8	327 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	PARP8	Q8N3A8	854 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR1K1	Q8NGR3	316 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR4Q3	Q8NH05	313 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	TOMM40L	Q969M1	308 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	RUNDC3B	Q96NL0	473 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	PRAM1	Q96QH2	718 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	HSD17B14	Q9BPX1	270 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	FAM213A	Q9BRX8	229 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC26A1	Q9H2B4	701 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	TMEM245	Q9H330	911 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	DPEP3	Q9H4B8	488 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	PRMT8	Q9NR22	394 aa	Predicted RBP	3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	GDF3	Q9NR23	364 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	CYP39A1	Q9NYL5	469 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	MGAT4A	Q9UM21	535 aa		3.34	□□□□□ -1.87
RAP1B-231	ENST00000544639	OLFM2	O95897	454 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	REN	P00797	406 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	SERPINF2	P08697	491 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	CCDC159	P0C7I6	412 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	OR9G9	P0C7N8	305 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FOSL2	P15408	326 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	BCL3	P20749	454 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FCAR	P24071	287 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	SPR	P35270	261 aa	Predicted RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	PTGER3	P43115	390 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	ALDH3B1	P43353	468 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	LIMK2	P53671	638 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	GEM	P55040	296 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	HERV-K104	P63124	156 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	KRT31	Q15323	416 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	P2RY14	Q15391	338 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	RAPH1	Q70E73	1250 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	TMUB2	Q71RG4	321 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	CDC20B	Q86Y33	519 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	ERC1	Q8IUD2	1116 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	CCDC71	Q8IV32	467 aa	Predicted RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	ABCA7	Q8IZY2	2146 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	LYG1	Q8N1E2	194 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FGFRL1	Q8N441	504 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	CARNMT1	Q8N4J0	409 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	CHDH	Q8NE62	594 aa	Predicted RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	EEF2KMT	Q96G04	330 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	SPAG8	Q99932	426 aa	Predicted RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	DCTN5	Q9BTE1	182 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	RPP25	Q9BUL9	199 aa	Known RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FUNDC2	Q9BWH2	189 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	RBM24	Q9BX46	236 aa	Known RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	NT5DC2	Q9H857	520 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	KCNMB3	Q9NPA1	279 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	PIGV	Q9NUD9	493 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	NARF	Q9UHQ1	456 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	DIMT1	Q9UNQ2	313 aa	Known RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FBXO7	Q9Y3I1	522 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	TEX264	Q9Y6I9	313 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	COL2A1	P02458	1487 aa	Predicted RBP	3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639	FGD5	Q6ZNL6	1462 aa		3.33	□□□□□ -1.88
RAP1B-231	ENST00000544639		A0A1B0GTH9	108 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	TEX48	A0A1B0GUV7	120 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	YJEFN3	A6XGL0	299 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	ERI2	A8K979	691 aa	Known RBP	3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	MEI4	A8MW99	385 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	DDX39A	O00148	427 aa	Known RBP	3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	VEGFD	O43915	354 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	DUSP11	O75319	330 aa	Known RBP	3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	CXCL14	O95715	111 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	MT-ND1	P03886	318 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	TKTL1	P51854	596 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	PCK2	Q16822	640 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	TMEM44	Q2T9K0	475 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	HIGD2B	Q4VC39	106 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	ZNF506	Q5JVG8	444 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	AGAP7P	Q5VUJ5	663 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	WDR25	Q64LD2	544 aa	Predicted RBP	3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	LEMD1	Q68G75	181 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	REG3G	Q6UW15	175 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	TOM1L2	Q6ZVM7	507 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	LRRC49	Q8IUZ0	686 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	ICA1L	Q8NDH6	482 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	OR4F5	Q8NH21	305 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	SLCO4A1	Q96BD0	722 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	RPGRIP1	Q96KN7	1286 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	CAPNS2	Q96L46	248 aa		3.32	□□□□□ -1.88
RAP1B-231	ENST00000544639	C1orf147	Q96MC9	270 aa	Predicted RBP	3.32	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms