RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 YARS2Q9Y2Z4 477 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 AAR2Q9Y312 384 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ZDHHC9Q9Y397 364 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CACNA1CQ13936 2221 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 FLNAP21333 2647 aaKnown RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ACANP16112 2415 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 STAB1Q9NY15 2570 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 A0A087X1B8 175 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ATP6AP2A0A1C7CYW4 349 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SYNDIG1LA6NDD5 238 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SERINC4A6NH21 518 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SLC16A5O15375 505 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 AKR1B10O60218 316 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ATP6AP2O75787 350 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 CDC123O75794 336 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 P04436 131 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 APOA4P06727 396 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 FHP07954 510 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 CNR1P21554 472 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 KDELR1P24390 212 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 HRH2P25021 359 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PSMB5P28074 263 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 RPA3P35244 121 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 IDUAP35475 653 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 HSD17B2P37059 387 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PCYT1AP49585 367 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF136P52737 540 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF140P52738 457 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 DIO3P55073 304 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ADARP55265 1226 aaKnown RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ABATP80404 500 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 TAP2Q03519 686 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 FOXO1Q12778 655 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 CAPRIN1Q14444 709 aaKnown RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 GRB7Q14451 532 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PRPSAP1Q14558 356 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 MST1LQ2TV78 715 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PGS1Q32NB8 556 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ACSF3Q4G176 576 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PDLIM3Q53GG5 364 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 C6orf52Q5T4I8 152 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 NSUN5P2Q63ZY6 315 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ITPRIPL1Q6GPH6 555 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SCIMPQ6UWF3 145 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 RTL4Q6ZR62 310 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 QSOX2Q6ZRP7 698 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 FAM47EQ6ZV65 393 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SEM1Q6ZVN7 128 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ABHD13Q7L211 337 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PID1Q7Z2X4 250 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 IRF2BP2Q7Z5L9 587 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ADCK2Q7Z695 626 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 AMER2Q8N7J2 671 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF441Q8N8Z8 693 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 NAXEQ8NCW5 288 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PPHLN1Q8NEY8 458 aaKnown RBP3.75□□□□□ -1.81
SNHG1-220ENST00000544550 TNIP2Q8NFZ5 429 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 OR13C4Q8NGS5 318 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 NEIL3Q8TAT5 605 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SMPDL3AQ92484 453 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 TSLPQ969D9 159 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 C1GALT1C1Q96EU7 318 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PIK3IP1Q96FE7 263 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SGCZQ96LD1 299 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 FERMT1Q9BQL6 677 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ANP32EQ9BTT0 268 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 CNPPD1Q9BV87 410 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SFXN3Q9BWM7 321 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SHARPINQ9H0F6 387 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ISCUQ9H1K1 167 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 OR10A2Q9H208 303 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PIGMQ9H3S5 423 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 HAUS4Q9H6D7 363 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ARNT2Q9HBZ2 717 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 ACKR4Q9NPB9 350 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 SACM1LQ9NTJ5 587 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 DEPPQ9NTK1 212 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PSD3Q9NYI0 1048 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 HCN3Q9P1Z3 774 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 PCYOX1Q9UHG3 505 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 RSPH14Q9UHP6 348 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 FBXW2Q9UKT8 454 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 TESMINQ9Y4I5 508 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 LIPGQ9Y5X9 500 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 COL6A5A8TX70 2615 aa3.75□□□□□ -1.81
SNHG1-220ENST00000544550 MDC1Q14676 2089 aaKnown RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 JMJD1CQ15652 2540 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 TRBV11-1A0A0K0K1C0 115 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 A0A1W2PPV9 198 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 PINLYPA6NC86 204 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 MBD3L3A6NE82 208 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CD8B2A6NJW9 211 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 DEFB108AA8MXU0 73 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 NPIPB6E9PJ23 425 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 H3BML4 177 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 SGK494L7N484 410 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 KPNA5O15131 536 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 P2RX6O15547 441 aa3.74□□□□□ -1.81
SNHG1-220ENST00000544550 CTIFO43310 598 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms