RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CATSPER4Q7RTX7 472 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 NR2C2APQ86WQ0 139 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 ELMOD2Q8IZ81 293 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 MARVELD2Q8N4S9 558 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 DCLK2Q8N568 766 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 TEX26Q8N6G2 289 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 MRPL43Q8N983 215 aaKnown RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 CNBD1Q8NA66 436 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 SIDT2Q8NBJ9 832 aaKnown RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 TRIM58Q8NG06 486 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 SMAP2Q8WU79 429 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF486Q96H40 463 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 FAM111AQ96PZ2 611 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 DDX47Q9H0S4 455 aaKnown RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 HSD3B7Q9H2F3 369 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 PIGVQ9NUD9 493 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 DNPEPQ9ULA0 475 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 CASP8AP2Q9UKL3 1982 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 A0A087WZ39 114 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TRBV2A0A0J9YWF9 115 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 ECE2O60344 883 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 LRCH4O75427 683 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PRDM1O75626 825 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CPNE6O95741 557 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PAK4O96013 591 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 HMBSP08397 361 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 KCNJ10P78508 379 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CNTN1Q12860 1018 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PPP1R8Q12972 351 aaKnown RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 GPR50Q13585 617 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 SPHARQ15513 63 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 STX1AQ16623 288 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 EPC2Q52LR7 807 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 FGD3Q5JSP0 725 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF776Q68DI1 518 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 BHLHA9Q7RTU4 235 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 HDDC3Q8N4P3 179 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 RNF149Q8NC42 400 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 OR13C5Q8NGS8 318 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 ESAMQ96AP7 390 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CXorf58Q96LI9 332 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 GUCD1Q96NT3 240 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 INPP4AQ96PE3 977 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CTAGE1Q96RT6 745 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 NYXQ9GZU5 481 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 DCLRE1BQ9H816 532 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 C3orf14Q9HBI5 128 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 DBF4Q9UBU7 674 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 HOOK1Q9UJC3 728 aaKnown RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PLCL2Q9UPR0 1127 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CACNA1FO60840 1977 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 MAP3K15Q6ZN16 1313 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 LAMB1P07942 1786 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CFAP73A6NFT4 308 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 SERINC4A6NH21 518 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 IFITM10A6NMD0 228 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 KRT33AO76009 404 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 AP2A2O94973 939 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 MT-ATP6P00846 226 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 EPOP01588 193 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PATE4P0C8F1 98 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 PRKAR1AP10644 381 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 GHRP10912 638 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CEACAM1P13688 526 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CTNNA2P26232 953 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 SLC1A3P43003 542 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 KCNK10P57789 538 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 POLR2FP61218 127 aaKnown RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 SRSF9Q13242 221 aaKnown RBP eCLIP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 SGCGQ13326 291 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TSTA3Q13630 321 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 KARSQ15046 597 aaKnown RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TAF7Q15545 349 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TOR1AIP1Q5JTV8 583 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 DLEU7Q6UYE1 221 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 APLFQ8IW19 511 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 C9orf106Q8NAJ2 232 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 OR10G8Q8NGN5 311 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 GPR148Q8TDV2 347 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 GATAD1Q8WUU5 269 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 ARHGAP45Q92619 1136 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 MRPL53Q96EL3 112 aaKnown RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 NKX3-1Q99801 234 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM245Q9H330 911 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TRIM10Q9UDY6 481 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 FAM153AQ9UHL3 310 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 TSPAN16Q9UKR8 245 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 ELF5Q9UKW6 265 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 NIP7Q9Y221 180 aaKnown RBP eCLIP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 MTF2Q9Y483 593 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 OR1A2Q9Y585 309 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 CLCA3PQ9Y6N3 262 aa3.24□□□□□ -1.89
SCFD1-207ENST00000544052 IBTKQ9P2D0 1353 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-207ENST00000544052 RNF123Q5XPI4 1314 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 ECM29Q5VYK3 1845 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 KCNAB3O43448 404 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 B4GAT1O43505 415 aa3.23□□□□□ -1.89
SCFD1-207ENST00000544052 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
SCFD1-207ENST00000544052 EML2O95834 649 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms