RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ANKRD13BQ86YJ7 626 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 LRFN1Q9P244 771 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 LCHNA4D1U4 455 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 KDELR3O43731 214 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 RAB4AP20338 218 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 EVI2BP34910 448 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PRKXP51817 358 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 BCL2L15Q5TBC7 163 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 TREML1Q86YW5 311 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 ESX1Q8N693 406 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■■■■■ 33
CHD4-210ENST00000544040 DEDD2Q8WXF8 326 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 RHBDF1Q96CC6 855 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 NDUFAF4Q9P032 175 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 NLKQ9UBE8 527 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 CENPBD1B2RD01 187 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 H0YAE9 185 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 FAAHO00519 579 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 CNTN5O94779 1100 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 SPDEFO95238 335 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 NPPAP01160 153 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.046e-7■■□□□ 11.9
CHD4-210ENST00000544040 ANKRD54Q6NXT1 300 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 MARVELD2Q8N4S9 558 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 TSGA13Q96PP4 275 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 DOHHQ9BU89 302 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 ZNF442Q9H7R0 627 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 MDFIC2A0A1B0GVS7 189 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZNF705FA8MVS1 300 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 KLK3P07288 261 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 ERCC1P07992 297 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZNF705DP0CH99 300 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZNF705BP0CI00 300 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 HOXD8P13378 290 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 DRD5P21918 477 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 OXTRP30559 389 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 PLP2Q04941 152 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 CES4AQ5XG92 561 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZC3H14Q6PJT7 736 aaKnown RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 LBX2Q6XYB7 198 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 NUP43Q8NFH3 380 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 OR4K14Q8NGD5 310 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ASB15Q8WXK1 588 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 OR1F2PQ96R84 312 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 GJD2Q9UKL4 321 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 A0A0D9SEW6 157 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 EDDM13A0A1B0GTR0 161 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ALDH3B2P48448 385 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 HSD11B2P80365 405 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 HYAL4Q2M3T9 481 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 MS4A13Q5J8X5 152 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 FAM205BPQ63HN1 556 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 DUS1LQ6P1R4 473 aaKnown RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 BBS10Q8TAM1 723 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 FZD8Q9H461 694 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 NLE1Q9NVX2 485 aaPredicted RBP14.81□□□□□ -0.04
CHD4-210ENST00000544040 PEX12O00623 359 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 DPP6P42658 865 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ENPP6Q6UWR7 440 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD4-210ENST00000544040 MGLLQ99685 303 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 RXFP3Q9NSD7 469 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ATRNO75882 1429 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 FEZF1A0PJY2 475 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 A6NLC8 198 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 F8W036 122 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 BLOC1S1P78537 153 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 TRAM1Q15629 374 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZNF529Q6P280 563 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 TPRG1Q6ZUI0 275 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 TRIM46Q7Z4K8 759 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 NPLOC4Q8TAT6 608 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 IL21RQ9HBE5 538 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 RFPL2O75678 378 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 CSTAP01040 98 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 EPHA1P21709 976 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 NCS1P62166 190 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 DPY19L3Q6ZPD9 716 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 SLC9B2Q86UD5 537 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 SLAIN1Q8ND83 568 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 TMEM125Q96AQ2 219 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 OR4K3Q96R72 315 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 LMF1Q96S06 567 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 ZNF541Q9H0D2 1346 aa14.81□□□□□ -0.04
CHD4-210ENST00000544040 TSPAN15O95858 294 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 ADAP00813 363 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 FGL1Q08830 312 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 LRIF1Q5T3J3 769 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 HES5Q5TA89 166 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
CHD4-210ENST00000544040 FTMTQ8N4E7 242 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 SLCO2A1Q92959 643 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 PBDC1Q9BVG4 233 aa14.8□□□□□ -0.04
CHD4-210ENST00000544040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHD4-210ENST00000544040 FAM118AQ9NWS6 357 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms