RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 STT3AP46977 705 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 AQP5P55064 265 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 POLE2P56282 527 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 NME5P56597 212 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SLC26A5P58743 744 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 STX1BP61266 288 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 EMX2Q04743 252 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ZNF267Q14586 743 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 KIAA0040Q15053 153 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 PCOLCEQ15113 449 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ELAVL1Q15717 326 aaKnown RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 SMU1Q2TAY7 513 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 PGS1Q32NB8 556 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SLC9B1Q4ZJI4 515 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 FAM71E1Q6IPT2 247 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ANKRD26P1Q6NSI1 321 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 FAM180BQ6P0A1 224 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 RGS9BPQ6ZS82 235 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 R3HCC1LQ7Z5L2 792 aaKnown RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 SPATA19Q7Z5L4 167 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 TICAM1Q8IUC6 712 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SAMD14Q8IZD0 417 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 ST13P4Q8IZP2 240 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 MMP21Q8N119 569 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 LRRC25Q8N386 305 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 GALNT16Q8N428 558 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SIRT6Q8N6T7 355 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 OR14A16Q8NHC5 309 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 CEP70Q8NHQ1 597 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ZFP28Q8NHY6 868 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 DNAJB14Q8TBM8 379 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 M1APQ8TC57 530 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 DOK4Q8TEW6 326 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 RIT1Q92963 219 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ANKRD9Q96BM1 317 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 EGLN2Q96KS0 407 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ART5Q96L15 291 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ZBTB18Q99592 522 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 MESP1Q9BRJ9 268 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SLC25A23Q9BV35 468 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 DPY30Q9C005 99 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 OR8D2Q9GZM6 311 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 LHPPQ9H008 270 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 REEP4Q9H6H4 257 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ATAD3AQ9NVI7 634 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 FGFR1OP2Q9NVK5 253 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.91□□□□□ -1.46
LTBR-212ENST00000543542 PTGFRNQ9P2B2 879 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 HEY2Q9UBP5 337 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 BCAP29Q9UHQ4 241 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 LHX6Q9UPM6 363 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 MAPRE3Q9UPY8 281 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 CEP295Q9C0D2 2601 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 URB1O60287 2271 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 IGKV3D-11A0A0A0MRZ8 115 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TRBV11-1A0A0K0K1C0 115 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 E9PBE3 544 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TGFBR3LH3BV60 316 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SCAMP2O15127 329 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 UBDO15205 165 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CFLARO15519 480 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 PDPK1O15530 556 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TGDSO95455 350 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ALPPP05187 535 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SERPINA7P05543 415 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CELA2AP08217 269 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 PRR35P0CG20 571 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SLC35E2P0CK97 266 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ITGAMP11215 1152 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CPMP14384 443 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 NCF2P19878 526 aaPredicted RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 PRPS1L1P21108 318 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 IDH3AP50213 366 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CLCN2P51788 898 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 NCBP2P52298 156 aaKnown RBP eCLIP5.9□□□□□ -1.46
LTBR-212ENST00000543542 EFNA3P52797 238 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ARFIP2P53365 341 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CLNS1AP54105 237 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 GYS2P54840 703 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 DIO3P55073 304 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 MANFP55145 182 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 GNGT1P63211 74 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 KCNAB2Q13303 367 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 PTGR1Q14914 329 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ZNF750Q32MQ0 723 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CPTPQ5TA50 214 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 AGAP7PQ5VUJ5 663 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 HLA-DQA1Q5Y7H0 255 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 PLAG1Q6DJT9 500 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 EPGNQ6UW88 154 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 LINC00696Q6ZRV3 163 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 LARP4Q71RC2 724 aaKnown RBP eCLIP5.9□□□□□ -1.46
LTBR-212ENST00000543542 SLC29A4Q7RTT9 530 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SZRD1Q7Z422 152 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 APLFQ8IW19 511 aaPredicted RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 GALNT12Q8IXK2 581 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CCDC116Q8IYX3 515 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms