RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 TBX6O95947 436 aaPredicted RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 FUT4P22083 530 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 ELAVL4P26378 380 aaKnown RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 CSTF2P33240 577 aaKnown RBP eCLIP12.8□□□□□ -0.36
PPME1-208ENST00000543525 KCNJ5P48544 419 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 TMED10P49755 219 aaKnown RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 RHAGQ02094 409 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 HSPB3Q12988 150 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 FAM180BQ6P0A1 224 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 TRIM69Q86WT6 500 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 NLGN4XQ8N0W4 816 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 POC5Q8NA72 575 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 HPS1Q92902 700 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 RAB8BQ92930 207 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 EXOSC8Q96B26 276 aaKnown RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 OR5M11Q96RB7 305 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 SLC25A19Q9HC21 320 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 SIRT3Q9NTG7 399 aaPredicted RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 ACSS1Q9NUB1 689 aaPredicted RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 CUEDC1Q9NWM3 386 aaPredicted RBP12.8□□□□□ -0.36
PPME1-208ENST00000543525 REV1Q9UBZ9 1251 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 NDOR1Q9UHB4 597 aa12.8□□□□□ -0.36
PPME1-208ENST00000543525 LRRK1Q38SD2 2015 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 LOC110117498-PIK3R3F6TDL0 507 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 HMGN4O00479 90 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 SLC28A2O43868 658 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 ENTPD6O75354 484 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 CCT3P49368 545 aaKnown RBP12.79□□□□□ -0.36
PPME1-208ENST00000543525 XKP51811 444 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 CRISP3P54108 245 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 TRA2BP62995 288 aaKnown RBP12.79□□□□□ -0.36
PPME1-208ENST00000543525 NCF4Q15080 339 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 RAB42Q8N4Z0 105 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 PLA2G15Q8NCC3 412 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 KLHL6Q8WZ60 621 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 PIK3R3Q92569 461 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 RAB7BQ96AH8 199 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 HDAC8Q9BY41 377 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 RNF167Q9H6Y7 350 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 SEMA3GQ9NS98 782 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 TAS2R16Q9NYV7 291 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 SEC14L3Q9UDX4 400 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 SLC23A2Q9UGH3 650 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 MKLN1Q9UL63 735 aa12.79□□□□□ -0.36
PPME1-208ENST00000543525 ANHXE9PGG2 379 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 HAT1O14929 419 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 PTTG1O95997 202 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 FGBP02675 491 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 ETV6P41212 452 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 MAGEA8P43361 318 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 MESP2Q0VG99 397 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 TP53BP2Q13625 1128 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 ZNF234Q14588 700 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 MLC1Q15049 377 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 SEC23BQ15437 767 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 METRNLQ641Q3 311 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 STEAP3Q658P3 488 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 TCTN3Q6NUS6 607 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 HEATR4Q86WZ0 1026 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 KRT73Q86Y46 540 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 VANGL1Q8TAA9 524 aaPredicted RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 SLC35G5Q96KT7 338 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 IL4I1Q96RQ9 567 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 KLHL25Q9H0H3 589 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 ABCG4Q9H172 646 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 CRNNQ9UBG3 495 aaPredicted RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 P2RX2Q9UBL9 471 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 PCYT1BQ9Y5K3 369 aaPredicted RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 KIF26AQ9ULI4 1882 aaPredicted RBP12.78□□□□□ -0.36
PPME1-208ENST00000543525 UNC80Q8N2C7 3258 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 FEZF1A0PJY2 475 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 PDZK1P1A8MUH7 402 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 FAM227AF5H4B4 570 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 H3BN98 237 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 H7BY64 318 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 OR1F1O43749 312 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 SLITRK5O94991 958 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 SNX4O95219 450 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 DLGAP3O95886 979 aa12.78□□□□□ -0.36
PPME1-208ENST00000543525 PCCBP05166 539 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms