RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RECKO95980 971 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CSF2RBP32927 897 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 MAGEA2P43356 314 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 DSTNP60981 165 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 KCNJ10P78508 379 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CDK6Q00534 326 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 TGM3Q08188 693 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 FADDQ13158 208 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 KCNAB1Q14722 419 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CEBPEQ15744 281 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 PRTGQ2VWP7 1150 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SPDYE7PQ495Y7 208 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CEACAM20Q6UY09 585 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 KANSL1Q7Z3B3 1105 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CA13Q8N1Q1 262 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM105Q8N8V8 129 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 NCSTNQ92542 709 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 KAT2AQ92830 837 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 GATA6Q92908 595 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 C16orf58Q96GQ5 468 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 MAGIXQ9H6Y5 334 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 NEUROD4Q9HD90 331 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 PADI4Q9UM07 663 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SLC22A7Q9Y694 548 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 PI4KAP42356 2102 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 ZDBF2Q9HCK1 2354 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 A0A1B0GTW7 788 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 RHPN2P1A8MT19 583 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 HMGN4O00479 90 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 LAMTOR5O43504 91 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 RDH16O75452 317 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CST1P01037 141 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 ZNF23P17027 643 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 FUT4P22083 530 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 NTSP30990 170 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 GPC1P35052 558 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 MC3RP41968 323 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 PCBP3P57721 371 aaKnown RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SHC2P98077 582 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 BIRC2Q13490 618 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 NHSL2Q5HYW2 709 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SZRD1Q7Z422 152 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 ZDHHC21Q8IVQ6 265 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 EID3Q8N140 333 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 NATD1Q8N6N6 113 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 Q8N9G6 341 aaPredicted RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 OR9A4Q8NGU2 314 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 OR2I1PQ8NGU4 316 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 GAB3Q8WWW8 586 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 TPD52L3Q96J77 140 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 C7orf34Q96L11 122 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 ELF4Q99607 663 aaPredicted RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 CCDC3Q9BQI4 270 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 OR51I1Q9H343 314 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 ZCCHC3Q9NUD5 404 aaKnown RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 PILRBQ9UKJ0 227 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 SAMD4AQ9UPU9 718 aaKnown RBP11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 KCNE3Q9Y6H6 103 aa11.56□□□□□ -0.56
AP003559.1-201ENST00000540906 RP1P56715 2156 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 IGHV1OR21-1A0A087WYE8 117 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 M0QX08 132 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 CYR61O00622 381 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 ZSCAN9O15535 394 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 DENRO43583 198 aaKnown RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 FOXS1O43638 330 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 FGF17O60258 216 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 GUCY1B2O75343 617 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 DEAF1O75398 565 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 BCHEP06276 602 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 OR12D1P0DN82 309 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 CSNK2A2P19784 350 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 PRIM2P49643 509 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 PRKAG1P54619 331 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 MRPS35P82673 323 aaKnown RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 FUT5Q11128 374 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 PDK3Q15120 406 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 OTUD3Q5T2D3 398 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 UGT2A3Q6UWM9 527 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 CCDC80Q76M96 950 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 ABHD13Q7L211 337 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 WDR53Q7Z5U6 358 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 SLC44A2Q8IWA5 706 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 CHERPQ8IWX8 916 aaKnown RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 SLC38A5Q8WUX1 472 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 PIGKQ92643 395 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 TBC1D20Q96BZ9 403 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 TMEM19Q96HH6 336 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 SLC35G5Q96KT7 338 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 C9orf16Q9BUW7 83 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 RBCK1Q9BYM8 510 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 SMURF2Q9HAU4 748 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
AP003559.1-201ENST00000540906 RAB26Q9ULW5 256 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms