RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 FAM86B1E9PN63 330 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 DUSP11O75319 330 aaKnown RBP3.05□□□□□ -1.92
CCDC7-209ENST00000539197 DUSP14O95147 198 aaKnown RBP3.05□□□□□ -1.92
CCDC7-209ENST00000539197 FAM86B2P0C5J1 330 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 SOAT1P35610 550 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 FHITP49789 147 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 ABRQ12979 859 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 PSG7Q13046 419 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 GPR50Q13585 617 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 KCTD2Q14681 263 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 PAN3Q58A45 887 aaKnown RBP3.05□□□□□ -1.92
CCDC7-209ENST00000539197 IRGCQ6NXR0 463 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 FBXW8Q8N3Y1 598 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 SMYD1Q8NB12 490 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 RIT1Q92963 219 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 ST6GALNAC6Q969X2 333 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 RAB3CQ96E17 227 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 OR5M11Q96RB7 305 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 PRMT1Q99873 361 aaKnown RBP3.05□□□□□ -1.92
CCDC7-209ENST00000539197 IMPAD1Q9NX62 359 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 SPG21Q9NZD8 308 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 NEU3Q9UQ49 428 aa3.05□□□□□ -1.92
CCDC7-209ENST00000539197 ZNFX1Q9P2E3 1918 aaKnown RBP3.05□□□□□ -1.92
CCDC7-209ENST00000539197 EFCAB7A8K855 629 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 TRIM49D1C9J1S8 452 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 GRAP2O75791 330 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 ADRA2CP18825 462 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 ACKR3P25106 362 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 PRKCIP41743 596 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 NPBWR1P48145 328 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 SLC17A1Q14916 467 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 ANKRD55Q3KP44 614 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 TFDP3Q5H9I0 405 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 CASC4Q6P4E1 433 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 TMEM182Q6ZP80 229 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-209ENST00000539197 MEX3DQ86XN8 651 aaKnown RBP3.04□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF677Q86XU0 584 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 THNSL1Q8IYQ7 743 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 KIR2DL5BQ8NHK3 375 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 DPEP3Q9H4B8 488 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 CDC42BPBQ9Y5S2 1711 aa3.04□□□□□ -1.92
CCDC7-209ENST00000539197 TRIOBPQ9H2D6 2365 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 WDR46O15213 610 aaKnown RBP3.03□□□□□ -1.92
CCDC7-209ENST00000539197 FAM58BPP0C7Q3 252 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 OR3A1P47881 315 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 PTENP60484 403 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 OTPQ5XKR4 325 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 WDR25Q64LD2 544 aaPredicted RBP3.03□□□□□ -1.92
CCDC7-209ENST00000539197 ANKRD46Q86W74 232 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 METTL23Q86XA0 190 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 C14orf178Q8N769 122 aaPredicted RBP3.03□□□□□ -1.92
CCDC7-209ENST00000539197 SNRNP27Q8WVK2 155 aaKnown RBP3.03□□□□□ -1.92
CCDC7-209ENST00000539197 TTYH2Q9BSA4 534 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 MINDY3Q9H8M7 445 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 LMAN1LQ9HAT1 526 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 IL1RL2Q9HB29 575 aa3.03□□□□□ -1.92
CCDC7-209ENST00000539197 A0A0B4J203 849 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 H7C0S8 307 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 TBCAO75347 108 aaKnown RBP3.02□□□□□ -1.93
CCDC7-209ENST00000539197 RLN1P04808 185 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 SCN1BQ07699 218 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 PSMD6Q15008 389 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 ODF2Q5BJF6 829 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 ZNF658Q5TYW1 1059 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-209ENST00000539197 ZNF776Q68DI1 518 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-209ENST00000539197 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 SPATA19Q7Z5L4 167 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 CREBRFQ8IUR6 639 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 LAX1Q8IWV1 398 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 OR13F1Q8NGS4 319 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-209ENST00000539197 C16orf74Q96GX8 76 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 ERGIC2Q96RQ1 377 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 CHCHD3Q9NX63 227 aaKnown RBP3.02□□□□□ -1.93
CCDC7-209ENST00000539197 MLXQ9UH92 298 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 RAB26Q9ULW5 256 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 ARHGAP23Q9P227 1491 aa3.02□□□□□ -1.93
CCDC7-209ENST00000539197 TRAV34A0A0B4J273 112 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 ILVBLA1L0T0 632 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 CCDC162PA2VCL2 907 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 KBTBD13C9JR72 458 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 LRP3O75074 770 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 CSO75390 466 aaKnown RBP3.01□□□□□ -1.93
CCDC7-209ENST00000539197 GJB5O95377 273 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 VDRP11473 427 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 GJB2P29033 226 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 GP5P40197 560 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 TRPC1P48995 793 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 LINC00315P59091 139 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 FOLH1Q04609 750 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 TEFQ10587 303 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 EBI3Q14213 229 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 SHHQ15465 462 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 MICAQ29983 383 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 TATDN1Q6P1N9 297 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 KLHL7Q8IXQ5 586 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 RNF149Q8NC42 400 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 OR1K1Q8NGR3 316 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 OCC1Q8TAD7 63 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms