RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TUBB1Q9H4B7 451 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 CDCP1Q9H5V8 836 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 PNO1Q9NRX1 252 aaKnown RBP12.76□□□□□ -0.37
CD9-208ENST00000538834 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 PCNX3Q9H6A9 2034 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 PCNX1Q96RV3 2341 aa12.76□□□□□ -0.37
CD9-208ENST00000538834 TRAV17A0A0B4J275 112 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 DYTNA2CJ06 578 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 TTLL8A6PVC2 850 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 A8MUI8 341 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
CD9-208ENST00000538834 BPGMP07738 259 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
CD9-208ENST00000538834 S1PR1P21453 382 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SERPINB5P36952 375 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 ARL1P40616 181 aaPredicted RBP12.75□□□□□ -0.37
CD9-208ENST00000538834 ID2Q02363 134 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SRSF1Q07955 248 aaKnown RBP eCLIP12.75□□□□□ -0.37
CD9-208ENST00000538834 MGAT2Q10469 447 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 STX4Q12846 297 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 INAQ16352 499 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 CCNYL2Q5T2Q4 361 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 OR52E8Q6IFG1 317 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SLC48A1Q6P1K1 146 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 Q6ZSR9 355 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 CROCCP2Q86T23 111 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 FAM76AQ8TAV0 307 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SENP5Q96HI0 755 aaPredicted RBP12.75□□□□□ -0.37
CD9-208ENST00000538834 FBXL20Q96IG2 436 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SIGLEC12Q96PQ1 595 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 TAAR6Q96RI8 345 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 MECRQ9BV79 373 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
CD9-208ENST00000538834 ASF1BQ9NVP2 202 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 LUZP4Q9P127 313 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
CD9-208ENST00000538834 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 MYOCOSA0A1B0GUC4 107 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 C1orf226A1L170 272 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 GABRR3A8MPY1 467 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 C17orf105B2RV13 164 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 HRKO00198 91 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 RGS16O15492 202 aaPredicted RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 ZNF354AO60765 605 aaPredicted RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 PRAMEF2O60811 474 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 CBX6O95503 412 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 CHRNGP07510 517 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 SERPINB3P29508 390 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 GSTM5P46439 218 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 TAS2R50P59544 299 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 ARG2P78540 354 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 HMGCS1Q01581 520 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 FUT7Q11130 342 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 SPIN4Q56A73 249 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 CEP85LQ5SZL2 805 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 CTHRC1Q96CG8 243 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 SLX1AQ9BQ83 275 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 PELOQ9BRX2 385 aaKnown RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 ILKAPQ9H0C8 392 aaPredicted RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 CXorf21Q9HAI6 301 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 TAS2R7Q9NYW3 318 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 MYOTQ9UBF9 498 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 HEY2Q9UBP5 337 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 EXO1Q9UQ84 846 aaKnown RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 DNAJC15Q9Y5T4 150 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 CLCA3PQ9Y6N3 262 aa12.74□□□□□ -0.37
CD9-208ENST00000538834 NCOA6Q14686 2063 aaPredicted RBP12.74□□□□□ -0.37
CD9-208ENST00000538834 ASH1LQ9NR48 2969 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 ASPDHA6ND91 283 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 GLOD5A6NK44 160 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 PYCARD-AS1I3L0S3 204 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 AZIN1O14977 448 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 TM9SF1O15321 606 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 BIRC5O15392 142 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 GUCY1B2O75343 617 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 RSL1D1O76021 490 aaKnown RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 ZFAND5O76080 213 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 ATP1B1P05026 303 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 DRD2P14416 443 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 TIA1P31483 386 aaKnown RBP eCLIP12.73□□□□□ -0.37
CD9-208ENST00000538834 HLCSP50747 726 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 TDGF1P3P51864 188 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 HK2P52789 917 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 MAPK12P53778 367 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 SLC18A1P54219 525 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 SLC37A1P57057 533 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 RNF4P78317 190 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 DUSP2Q05923 314 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 ASPHQ12797 758 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 MPEG1Q2M385 716 aa12.73□□□□□ -0.37
CD9-208ENST00000538834 ARL13AQ5H913 290 aaPredicted RBP12.73□□□□□ -0.37
CD9-208ENST00000538834 CFAP157Q5JU67 520 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms