RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 DUSP6Q16828 381 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 TCTN3Q6NUS6 607 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 ZNF793Q6ZN11 406 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 YAF2Q8IY57 180 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 RAB42Q8N4Z0 105 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 TP53I13Q8NBR0 393 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-204ENST00000538492 OR6Q1Q8NGQ2 317 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 GANCQ8TET4 914 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 CREB3L4Q8TEY5 395 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 COL21A1Q96P44 957 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 DCSTAMPQ9H295 470 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 FTSJ1Q9UET6 329 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 CD72P21854 359 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 CNR2P34972 360 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 GPC1P35052 558 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 RAB28P51157 221 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 CRISP1P54107 249 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 CRISP3P54108 245 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 INAQ16352 499 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 NATD1Q8N6N6 113 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 ZNF513Q8N8E2 541 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-204ENST00000538492 OR4D11Q8NGI4 311 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 XAGE5Q8WWM1 108 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 NT5DC2Q9H857 520 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 DDX31Q9H8H2 851 aaKnown RBP23.6■■□□□ 1.37
RAB40C-204ENST00000538492 PHPT1Q9NRX4 125 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-204ENST00000538492 OBP2AQ9NY56 170 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 LRIT2A6NDA9 550 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 SOX14O95416 240 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 ADORA3P0DMS8 318 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 EN2P19622 333 aaPredicted RBP23.59■■□□□ 1.37
RAB40C-204ENST00000538492 SOX9P48436 509 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 FRMPD2BQ6IN97 320 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 KIAA1161Q6NSJ0 714 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 PTCHD4Q6ZW05 846 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 HMGN2P46Q86SG4 172 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 MAPKAP1Q9BPZ7 522 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 TREX2Q9BQ50 279 aaPredicted RBP23.59■■□□□ 1.37
RAB40C-204ENST00000538492 PSD2Q9BQI7 771 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 TRPV4Q9HBA0 871 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 C11orf16Q9NQ32 467 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 SEC14L3Q9UDX4 400 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 MYO9BQ13459 2157 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 PRAMEF27A3QJZ7 478 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 IGFBP1P08833 259 aaPredicted RBP23.59■■□□□ 1.37
RAB40C-204ENST00000538492 ALPPL2P10696 532 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 GRK3P35626 688 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 FEN1P39748 380 aaKnown RBP23.59■■□□□ 1.37
RAB40C-204ENST00000538492 LACC1Q8IV20 430 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 MFSD4AQ8N468 514 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 S100ZQ8WXG8 99 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 ROGDIQ9GZN7 287 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 OR51I1Q9H343 314 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 GLIPR2Q9H4G4 154 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 TRPC4Q9UBN4 977 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 OSGIN1Q9UJX0 560 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 TMCC3Q9ULS5 477 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 DOCK8Q8NF50 2099 aa23.59■■□□□ 1.37
RAB40C-204ENST00000538492 A0A0A6YYD5 115 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 ZAR1LA6NP61 321 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 HSMCR30P0CW71 290 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 GRK5P34947 590 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 FZD3Q9NPG1 666 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 FBXO8Q9NRD0 319 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 C4orf51C9J302 202 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 TIE1P35590 1138 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 BCL6P41182 706 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 PRKAG1P54619 331 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 TCEA2Q15560 299 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 PITHD1Q9GZP4 211 aaPredicted RBP23.58■■□□□ 1.37
RAB40C-204ENST00000538492 MTIF3Q9H2K0 278 aaKnown RBP23.58■■□□□ 1.37
RAB40C-204ENST00000538492 KCNK12Q9HB15 430 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 DAPK2Q9UIK4 370 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 GPSM3Q9Y4H4 160 aa23.58■■□□□ 1.37
RAB40C-204ENST00000538492 PDZK1P1A8MUH7 402 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 OR10H3O60404 316 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 CLEC3AO75596 197 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 ERAL1O75616 437 aaKnown RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 APODP05090 189 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 ADRA2AP08913 450 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 C5AR1P21730 350 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 ELAVL4P26378 380 aaKnown RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 MAT2AP31153 395 aaKnown RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 RAB15P59190 212 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 IFITM3Q01628 133 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 SGCGQ13326 291 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 SOWAHCQ53LP3 525 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 AMDHD1Q96NU7 426 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 IL4I1Q96RQ9 567 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 YIPF4Q9BSR8 244 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 SLC6A17Q9H1V8 727 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 SEMA3GQ9NS98 782 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 ACSS1Q9NUB1 689 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 ZCCHC3Q9NUD5 404 aaKnown RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 LOC100506127A0A0U1RQW1 187 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 FUOMA2VDF0 154 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 BOLA2-SMG1P6H3BVE0 249 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 PDE9AO76083 593 aa23.57■■□□□ 1.36
RAB40C-204ENST00000538492 DDX5P17844 614 aaKnown RBP23.57■■□□□ 1.36
RAB40C-204ENST00000538492 KCNJ5P48544 419 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms