RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SOX18P35713 384 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 AP1S2P56377 157 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 SRYQ05066 204 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 CAPRIN1Q14444 709 aaKnown RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 CHRFAM7AQ494W8 412 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 NHSL2Q5HYW2 709 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 SEL1L2Q5TEA6 688 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 BICRALQ6AI39 1079 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 TRIM40Q6P9F5 258 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 GSTA5Q7RTV2 222 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 THOC6Q86W42 341 aaKnown RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 DND1Q8IYX4 353 aaKnown RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 ZPLD1Q8TCW7 415 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 DOK4Q8TEW6 326 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 FBXL8Q96CD0 374 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 ZFP3Q96NJ6 502 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 QRFPRQ96P65 431 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 FAM111AQ96PZ2 611 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 SERINC2Q96SA4 455 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 TM9SF2Q99805 663 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 REXO4Q9GZR2 422 aaKnown RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 CXorf56Q9H5V9 222 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 C20orf96Q9NUD7 363 aaPredicted RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 TAS2R13Q9NYV9 303 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 PACSIN3Q9UKS6 424 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 FBXO5Q9UKT4 447 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 SLC22A14Q9Y267 594 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 WIF1Q9Y5W5 379 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 EPN1Q9Y6I3 576 aaPredicted RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 KCNE2Q9Y6J6 123 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 HEATR5AQ86XA9 2040 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 H0Y3Z8 333 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 HRKO00198 91 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 TLX2O43763 284 aaPredicted RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 DYRK3O43781 588 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 H2AFYO75367 372 aaKnown RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 SMNDC1O75940 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLPB-208ENST00000538021 TPSB2P20231 275 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 NAGLUP54802 743 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 MTTPP55157 894 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 SARNPP82979 210 aaKnown RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 TIAL1Q01085 375 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLPB-208ENST00000538021 TBX2Q13207 712 aaPredicted RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 TPSAB1Q15661 275 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 CLEC12BQ2HXU8 276 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 TMIGD1Q6UXZ0 262 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 C4orf22Q6V702 233 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 ZNF550Q7Z398 422 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 YRDCQ86U90 279 aaKnown RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 OR4N5Q8IXE1 308 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 TTLQ8NG68 377 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 OR2L5Q8NG80 312 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 PPWD1Q96BP3 646 aaKnown RBP10.16□□□□□ -0.78
CLPB-208ENST00000538021 RILPQ96NA2 401 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 DGAT2Q96PD7 388 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 TUBA1CQ9BQE3 449 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 UBQLN3Q9H347 655 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 C15orf41Q9Y2V0 281 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 ABCA1O95477 2261 aa10.16□□□□□ -0.78
CLPB-208ENST00000538021 IQANK1A0A1B0GTG1 560 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 ZCWPW2A0A1B0GU75 182 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 TP53I11O14683 189 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 GNB5O14775 395 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 WIPF1O43516 503 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 SNX4O95219 450 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 IGKV3-11P04433 115 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 PAX1P15863 534 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 GCKP35557 465 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 FBXW4P57775 412 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 IL2P60568 153 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 CDK16Q00536 496 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 GAB1Q13480 694 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 SLBPQ14493 270 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLPB-208ENST00000538021 NTRK2Q16620 822 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 KRTAP24-1Q3LI83 254 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 ABHD17CQ6PCB6 329 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 TMEM64Q6YI46 380 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 SLC29A4Q7RTT9 530 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 KIAA1328Q86T90 577 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 CALML6Q8TD86 181 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 ANKRD9Q96BM1 317 aaPredicted RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 RBM18Q96H35 190 aaKnown RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 HES6Q96HZ4 224 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 MAPKAP1Q9BPZ7 522 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 REG4Q9BYZ8 158 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 ACBD3Q9H3P7 528 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 IARS2Q9NSE4 1012 aaKnown RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 ZNF701Q9NV72 531 aaPredicted RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 TEX10Q9NXF1 929 aaPredicted RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 REXO2Q9Y3B8 237 aaKnown RBP10.15□□□□□ -0.78
CLPB-208ENST00000538021 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 SPACA6W5XKT8 324 aa10.15□□□□□ -0.78
CLPB-208ENST00000538021 MED12Q93074 2177 aa10.14□□□□□ -0.79
CLPB-208ENST00000538021 RAI1Q7Z5J4 1906 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms