RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SH2D4BQ5SQS7 431 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 CLEC6AQ6EIG7 209 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 TRIM46Q7Z4K8 759 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 DDIASQ8IXT1 998 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 KIF2BQ8N4N8 673 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 TMEM156Q8N614 296 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 FAM76AQ8TAV0 307 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 SLC2A12Q8TD20 617 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 RIT1Q92963 219 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 CNPPD1Q9BV87 410 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 NKIRAS1Q9NYS0 192 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 VPS4AQ9UN37 437 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 PCDHA9Q9Y5H5 950 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 ZNF462Q96JM2 2506 aa20.39■□□□□ 0.85
SSPN-204ENST00000535504 WDR91A4D1P6 747 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 ERAL1O75616 437 aaKnown RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 ANXA4P09525 319 aaPredicted RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 SLC35E2P0CK97 266 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 DRD2P14416 443 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 TNFSF10P50591 281 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 INPP5JQ15735 1006 aaPredicted RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 INAQ16352 499 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 FAM180AQ6UWF9 173 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 ZCCHC23Q6ZST2 131 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 FAM98AQ8NCA5 519 aaKnown RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 APCDD1LQ8NCL9 501 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 CDC26Q8NHZ8 85 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 THAP3Q8WTV1 239 aaPredicted RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 PTPMT1Q8WUK0 201 aaPredicted RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 TMEM125Q96AQ2 219 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 KLHL29Q96CT2 875 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 APIPQ96GX9 242 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 CLDN16Q9Y5I7 305 aa20.38■□□□□ 0.85
SSPN-204ENST00000535504 COPG1Q9Y678 874 aaKnown RBP20.38■□□□□ 0.85
SSPN-204ENST00000535504 TMEM114B3SHH9 223 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 SEC22BO75396 215 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 F10P00742 488 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 SERPINE1P05121 402 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 CHN1P15882 459 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 GRK2P25098 689 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 GALNSP34059 522 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 ETV4P43268 484 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 CYB561P49447 251 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 XKP51811 444 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 MLF1P58340 268 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 ZNF763Q0D2J5 394 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 NR6A1Q15406 480 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 SLC29A4Q7RTT9 530 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 ANKRD42Q8N9B4 389 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 TMEM178AQ8NBL3 297 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 OR8K3Q8NH51 312 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 ZBTB9Q96C00 473 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 TM4SF18Q96CE8 201 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 CCT7Q99832 543 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 ENTPD4Q9Y227 616 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 DLGAP4Q9Y2H0 992 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 WBP11Q9Y2W2 641 aaKnown RBP20.37■□□□□ 0.85
SSPN-204ENST00000535504 TRAF6Q9Y4K3 522 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 PCDHGA10Q9Y5H3 936 aa20.37■□□□□ 0.85
SSPN-204ENST00000535504 BOD1L1Q8NFC6 3051 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 PRAMEF2O60811 474 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 FGF4P08620 206 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 PORP16435 677 aaPredicted RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 CSNK2A2P19784 350 aaPredicted RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 NT5EP21589 574 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 ZNF267Q14586 743 aaPredicted RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 CHI3L2Q15782 390 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 SPRED3Q2MJR0 410 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 TNFAIP8L3Q5GJ75 292 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 KANK2Q63ZY3 851 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 SLC48A1Q6P1K1 146 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 GALNT18Q6P9A2 607 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 RNF111Q6ZNA4 994 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 RNF165Q6ZSG1 346 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 HDXQ7Z353 690 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 GALNT12Q8IXK2 581 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 CATSPER1Q8NEC5 780 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 AGR3Q8TD06 166 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 TWIST2Q8WVJ9 160 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 PPWD1Q96BP3 646 aaKnown RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 SENP5Q96HI0 755 aaPredicted RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 EBPLQ9BY08 206 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 LRTM1Q9HBL6 345 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 MIEF1Q9NQG6 463 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 C1orf109Q9NX04 203 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 SIRT5Q9NXA8 310 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 LRFN1Q9P244 771 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 UTS2RQ9UKP6 389 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 YARS2Q9Y2Z4 477 aaKnown RBP20.36■□□□□ 0.85
SSPN-204ENST00000535504 CSAG2Q9Y5P2 127 aa20.36■□□□□ 0.85
SSPN-204ENST00000535504 CPAMD8Q8IZJ3 1885 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 PGRMC2O15173 223 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 CHRNGP07510 517 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 IL3P08700 152 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 CPMP14384 443 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 DDX5P17844 614 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 MAPK1P28482 360 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 SSR4P51571 173 aa20.35■□□□□ 0.85
SSPN-204ENST00000535504 MAGOHP61326 146 aaKnown RBP20.35■□□□□ 0.85
SSPN-204ENST00000535504 TUBA3CQ13748 450 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms