RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ANKRD33BA6NCL7 494 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 E5RI56 91 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 H0Y3Z8 333 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 HRKO00198 91 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 UBFD1O14562 309 aaKnown RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 AKR1B10O60218 316 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 LMX1BO60663 402 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 CTNSO60931 367 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 VAPBO95292 243 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ACTL6AO96019 429 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 DANCRP0C864 163 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 MPC1LP0DKB6 136 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF16P17020 682 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 AHRP35869 848 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 RPL21P46778 160 aaKnown RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 KCNJ5P48544 419 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 STARP49675 285 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 DEFA6Q01524 100 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ID2Q02363 134 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 IQCB1Q15051 598 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 TCEAL1Q15170 157 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 TOR1AIP1Q5JTV8 583 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 CYB5R2Q6BCY4 276 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 HIST2H2BDQ6DRA6 164 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 CES3Q6UWW8 571 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 MILR1Q7Z6M3 343 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF595Q8IYB9 648 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 PPM1NQ8N819 430 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 CNEP1R1Q8N9A8 125 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 LILRB1Q8NHL6 650 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 DIO2Q92813 273 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 UCN3Q969E3 161 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 PGM2Q96G03 612 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 PLPPR2Q96GM1 343 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 SNF8Q96H20 258 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 SENP5Q96HI0 755 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 RILPQ96NA2 401 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 SLC39A3Q9BRY0 314 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ETNK1Q9HBU6 452 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 ELOVL5Q9NYP7 299 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 FETUBQ9UGM5 382 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 AMFRQ9UKV5 643 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 PDE10AQ9Y233 779 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 EFR3BQ9Y2G0 817 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 MAGED1Q9Y5V3 778 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-206ENST00000535290 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 URADA6NGE7 173 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 ERI2A8K979 691 aaKnown RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 EIF3FO00303 357 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 LDB3O75112 727 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SERPINC1P01008 464 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CGAP01215 116 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 IGKV3-11P04433 115 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SERPINA6P08185 405 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SAT1P21673 171 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 DPP4P27487 766 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SERPINB3P29508 390 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 MSH2P43246 934 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 KIR2DL2P43627 348 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SLC6A12P48065 614 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 MASP1P48740 699 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SESN2P58004 480 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 LOXL1Q08397 574 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 STX4Q12846 297 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 FAPQ12884 760 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CTBP1Q13363 440 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 NTRK2Q16620 822 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 TTLL9Q3SXZ7 439 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 PCID2Q5JVF3 399 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 FAM120AOSQ5T036 256 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 MRNIPQ6NTE8 343 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CENPUQ71F23 418 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SDCCAG8Q86SQ7 713 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 GRAMD2AQ8IUY3 354 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CPNE9Q8IYJ1 553 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 TBC1D19Q8N5T2 526 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SLC15A4Q8N697 577 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF610Q8N9Z0 462 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 FAM83FQ8NEG4 500 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 OR10H5Q8NGA6 315 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 RAB3IL1Q8TBN0 382 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 DOK4Q8TEW6 326 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CAVIN3Q969G5 261 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 NEIL2Q969S2 332 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 CTHRC1Q96CG8 243 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 MFSD3Q96ES6 412 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 KRT12Q99456 494 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 RHNO1Q9BSD3 238 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 HAUS8Q9BT25 410 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 ANP32EQ9BTT0 268 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 NPLQ9BXD5 320 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 KLHL4Q9C0H6 718 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 TEX10Q9NXF1 929 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 HEY2Q9UBP5 337 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 COPS7AQ9UBW8 275 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 INTUQ9ULD6 942 aa7.49□□□□□ -1.21
CLIP1-206ENST00000535290 MRPS33Q9Y291 106 aaKnown RBP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLIP1-206ENST00000535290 PLOD2O00469 737 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms