RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SCAMP2O15127 329 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 RBBP9O75884 186 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 GNRH1P01148 92 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 IFNA6P05013 189 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CD1AP06126 327 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TPOP07202 933 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TAF1CQ15572 869 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 CCL15Q16663 113 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SLC39A12Q504Y0 691 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ZBTB37Q5TC79 503 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 KCTD18Q6PI47 426 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 C16orf59Q7L2K0 433 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.87□□□□□ -1.79
SOX6-217ENST00000533870 TMEM145Q8NBT3 493 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 DBF4BQ8NFT6 615 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 GOT1L1Q8NHS2 421 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 CPNE2Q96FN4 548 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 RNF32Q9H0A6 362 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 LDAHQ9H6V9 325 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TCF7L1Q9HCS4 588 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MEPEQ9NQ76 525 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 PLCL2Q9UPR0 1127 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MRPS7Q9Y2R9 242 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 TMA7Q9Y2S6 64 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 PRELID3BQ9Y3B1 194 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 RIPK3Q9Y572 518 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TBC1D3KA0A087X1G2 549 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 A0A1B0GUH1 482 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 hCG_1807616A0A1W2PRN6 198 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TBC1D3BA6NDS4 549 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TBC1D3FA6NER0 549 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 C2orf74A8MZ97 194 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 GMDSO60547 372 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 POP7O75817 140 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 IGLV3-25P01717 112 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TFPTP0C1Z6 253 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SLC35G4P0C7Q5 338 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 HAPLN1P10915 354 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 PPP3CBP16298 524 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 HDCP19113 662 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CERS1P27544 350 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ARRB2P32121 409 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ARPP19P56211 112 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CLDN20P56880 219 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ADAM8P78325 824 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 PLIN5Q00G26 463 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MPPED2Q15777 294 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 EXOC3L2Q2M3D2 409 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TMEM236Q5W0B7 351 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 FAM205BPQ63HN1 556 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TBC1D3GQ6DHY5 549 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 RTL6Q6ICC9 239 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 GRHL2Q6ISB3 625 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SBSNQ6UWP8 590 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 LDB1Q86U70 411 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 TCEANCQ8N8B7 351 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TEX19Q8NA77 164 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 OR1M1Q8NGA1 313 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 OR5M3Q8NGP4 307 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ISG20Q96AZ6 181 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 DCLRE1CQ96SD1 692 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 NELL2Q99435 816 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TSNAXQ99598 290 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 DPH2Q9BQC3 489 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 SLC35A5Q9BS91 424 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 COMMD4Q9H0A8 199 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SAV1Q9H4B6 383 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 PHPT1Q9NRX4 125 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.87□□□□□ -1.79
SOX6-217ENST00000533870 RBMX2Q9Y388 322 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 ALG5Q9Y673 324 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 DNMT3AQ9Y6K1 912 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 TLX2O43763 284 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 NIPSNAP2O75323 286 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 UBXN7O94888 489 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CYP17A1P05093 508 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 PRKCGP05129 697 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 FHP07954 510 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 FOSL1P15407 271 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 IDSP22304 550 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ACADLP28330 430 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CCND3P30281 292 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 SSTP61278 116 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ACSM1Q08AH1 577 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CAMK2DQ13557 499 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 IRF3Q14653 427 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SHROOM1Q2M3G4 852 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 THOC6Q86W42 341 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 ADGRG3Q86Y34 549 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 RDH10Q8IZV5 341 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SPATA6LQ8N4H0 392 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TRAM1L1Q8N609 369 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 HERVK_113Q902F9 699 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TCEAL3Q969E4 200 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 HMCESQ96FZ2 354 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 OR2A14Q96R47 310 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TMEM43Q9BTV4 400 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 PPIL3Q9H2H8 161 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 ZNF334Q9HCZ1 680 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms