RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 KBTBD6Q86V97 674 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HAVCR2Q8TDQ0 301 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HMGB4Q8WW32 186 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 ARNTL2Q8WYA1 636 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 ZNF689Q96CS4 500 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 IGSF21Q96ID5 467 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 OR2M4Q96R27 311 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 PCYT2Q99447 389 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 C17orf62Q9BQA9 187 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 LIN28AQ9H9Z2 209 aaKnown RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 GIMAP2Q9UG22 337 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 NUFIP1Q9UHK0 495 aaKnown RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 KCNK6Q9Y257 313 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 COL1A1P02452 1464 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 BLOC1S5-TXNDC5H3BN57 136 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 NFKBIEO00221 500 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 APBB3O95704 486 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 RETP07949 1114 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 GNAO1P09471 354 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HNRNPA1P09651 372 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 IVDP26440 423 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 PREPP48147 710 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 ARRB1P49407 418 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 CREB5Q02930 508 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 CHAF1BQ13112 559 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 DNASE1L3Q13609 305 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SPHARQ15513 63 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 TEAD2Q15562 447 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 PGM2L1Q6PCE3 622 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 GDPGP1Q6ZNW5 385 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 RPS27LQ71UM5 84 aaKnown RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 PRSS48Q7RTY5 328 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 GPAT4Q86UL3 456 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SAMD12Q8N8I0 201 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 OR51G2Q8NGK0 314 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 OR6N1Q8NGY5 312 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 LRRC15Q8TF66 581 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 TTYH2Q9BSA4 534 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FOLH1BQ9HBA9 442 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 KLHL21Q9UJP4 597 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 WNT6Q9Y6F9 365 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 BORCS7-ASMTA0A0B4J1R7 106 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 IGKV6-21A0A0C4DH24 114 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FAM72CH0Y354 149 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 VILLO15195 856 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HCRTO43612 131 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 UGDHO60701 494 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 CSN2P05814 226 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 HOXB2P14652 356 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 CELP19835 753 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 RPS3P23396 243 aaKnown RBP eCLIP6.72□□□□□ -1.337e-7■■■□□ 16.1
CTNND1-236ENST00000533667 RBMXP38159 391 aaKnown RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 RGS6P49758 472 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 RPS21P63220 83 aaKnown RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FGL1Q08830 312 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 AMZ1Q400G9 498 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SLC36A3Q495N2 470 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 LY6G5CQ5SRR4 150 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FAM72AQ5TYM5 149 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 OR52E8Q6IFG1 317 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FAM72DQ6L9T8 149 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SSX9Q7RTT3 188 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 FAM72BQ86X60 149 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 UBQLNLQ8IYU4 475 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 NLGN2Q8NFZ4 835 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 OR56A3Q8NH54 315 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 CNIH3Q8TBE1 160 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 THAP4Q8WY91 577 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 SAMD11Q96NU1 681 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 METTL7AQ9H8H3 244 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 ZNF334Q9HCZ1 680 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-236ENST00000533667 TXNRD2Q9NNW7 524 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 ERVK-18Q9QC07 812 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 UBQLN2Q9UHD9 624 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 BACE2Q9Y5Z0 518 aa6.72□□□□□ -1.33
CTNND1-236ENST00000533667 H3BUI4 141 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 AURKAO14965 403 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 SCAMP2O15127 329 aaKnown RBP6.71□□□□□ -1.33
CTNND1-236ENST00000533667 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-236ENST00000533667 PAHP00439 452 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 FGF4P08620 206 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 EDNRBP24530 442 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 AGTR1P30556 359 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 OXTRP30559 389 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 HK3P52790 923 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 S100A10P60903 97 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 RPS15AP62244 130 aaKnown RBP6.71□□□□□ -1.33
CTNND1-236ENST00000533667 SLC10A2Q12908 348 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-236ENST00000533667 C1orf220Q5T0J3 134 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 ALKBH2Q6NS38 261 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 TMED4Q7Z7H5 227 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 NUP43Q8NFH3 380 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 RAB8BQ92930 207 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 CHFRQ96EP1 664 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 HSPA12BQ96MM6 686 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 C16orf70Q9BSU1 422 aa6.71□□□□□ -1.33
CTNND1-236ENST00000533667 TIGARQ9NQ88 270 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms