RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NMRK1Q9NWW6 199 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 DCDC2Q9UHG0 476 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 ADAM29Q9UKF5 820 aa15.99■□□□□ 0.15
PHRF1-204ENST00000532550 DLX3O60479 287 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 OR6B1O95007 311 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 PDYNP01213 254 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 GSTA1P08263 222 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 PYGBP11216 843 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 ESRRAP11474 423 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 IMPDH1P20839 514 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 ATP5F1P24539 256 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 COL8A1P27658 744 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 SOX3P41225 446 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF267Q14586 743 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 RNFT1Q5M7Z0 435 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 CCNYL2Q5T2Q4 361 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 OPN5Q6U736 354 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 SLC22A9Q8IVM8 553 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 GSPT2Q8IYD1 628 aaKnown RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 LRRN4CLQ8ND94 238 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 PSD4Q8NDX1 1056 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 UBLCP1Q8WVY7 318 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 RIT1Q92963 219 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 FBXL20Q96IG2 436 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 CNPPD1Q9BV87 410 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 MRPL1Q9BYD6 325 aaKnown RBP15.98■□□□□ 0.15
PHRF1-204ENST00000532550 SLC12A4Q9UP95 1085 aa15.98■□□□□ 0.15
PHRF1-204ENST00000532550 A0A1B0GTL3 188 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 TFECO14948 347 aaPredicted RBP15.97■□□□□ 0.15
PHRF1-204ENST00000532550 GUCY1B2O75343 617 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 OR4F21O95013 312 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 AIFM1O95831 613 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 IGKV3-11P04433 115 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 SLC35E2P0CK97 266 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 ABOP16442 354 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 PIK3R1P27986 724 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 RFC3P40938 356 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 GPR85P60893 370 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 MPEG1Q2M385 716 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF750Q32MQ0 723 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 UNC50Q53HI1 259 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 PIGGQ5H8A4 983 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF678Q5SXM1 525 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 OR52E8Q6IFG1 317 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 LETMD1Q6P1Q0 360 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 BNC2Q6ZN30 1099 aaPredicted RBP15.97■□□□□ 0.15
PHRF1-204ENST00000532550 DGAT2L6Q6ZPD8 337 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 METTL4Q8N3J2 472 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 C16orf52Q8NHV5 167 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 NUBPLQ8TB37 319 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 DOK4Q8TEW6 326 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 UCN3Q969E3 161 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 SGCZQ96LD1 299 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 EPB41L4BQ9H329 900 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 BRF2Q9HAW0 419 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 FARSBQ9NSD9 589 aaKnown RBP15.97■□□□□ 0.15
PHRF1-204ENST00000532550 TRPS1Q9UHF7 1281 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF835Q9Y2P0 537 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 CACNA1DQ01668 2161 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 CROCCQ5TZA2 2017 aa15.97■□□□□ 0.15
PHRF1-204ENST00000532550 HRKO00198 91 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 PGRMC2O15173 223 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 KRT6AP02538 564 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 KRT6BP04259 564 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 GALNSP34059 522 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 KRT6CP48668 564 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 MAPK12P53778 367 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 ERVK-8P63133 956 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 ASPHQ12797 758 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 RASA2Q15283 850 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 C3AR1Q16581 482 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 SPRED3Q2MJR0 410 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 RNF111Q6ZNA4 994 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 RTL4Q6ZR62 310 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 SLC29A4Q7RTT9 530 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 CDYL2Q8N8U2 506 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 ZFP62Q8NB50 900 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-204ENST00000532550 OR4K14Q8NGD5 310 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 METTL6Q8TCB7 284 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 L2HGDHQ9H9P8 463 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 ZNF225Q9UK10 706 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 ERVK-19Q9WJR5 959 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 EML6Q6ZMW3 1958 aa15.96■□□□□ 0.15
PHRF1-204ENST00000532550 A0A1W2PPM1 405 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 HS6ST1O60243 411 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 CNR1P21554 472 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
PHRF1-204ENST00000532550 XKP51811 444 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 PRKAA2P54646 552 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 PLGLB1Q02325 96 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 NDUFAF5Q5TEU4 345 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 Q6ZPB1 254 aaPredicted RBP15.95■□□□□ 0.14
PHRF1-204ENST00000532550 GPRIN3Q6ZVF9 776 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 COMMD6Q7Z4G1 85 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 C9orf40Q8IXQ3 194 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 GOLM1Q8NBJ4 401 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 SLC22A8Q8TCC7 542 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 CCDC120Q96HB5 630 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 TMEM237Q96Q45 408 aa15.95■□□□□ 0.14
PHRF1-204ENST00000532550 TEX10Q9NXF1 929 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms