RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CDCP1Q9H5V8 836 aa12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 EXO1Q9UQ84 846 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 PCDHGA10Q9Y5H3 936 aa12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 HEMK1Q9Y5R4 338 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-220ENST00000532375 C1orf226A1L170 272 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 WDR91A4D1P6 747 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 C17orf105B2RV13 164 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 RSL1D1O76021 490 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 ZWINTO95229 277 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 F10P00742 488 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 IFNA16P05015 189 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 SLC35E2P0CK97 266 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 ALOX15P16050 662 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 GALNSP34059 522 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 CD96P40200 585 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 CLCN2P51788 898 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 MAGOHP61326 146 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 BTKQ06187 659 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 ACSM2AQ08AH3 577 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 MGAT2Q10469 447 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 MEP1AQ16819 746 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 PRR30Q53SZ7 412 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 ABHD17BQ5VST6 288 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 ACSM2BQ68CK6 577 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 BEST3Q8N1M1 668 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 SLC2A12Q8TD20 617 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 DOK4Q8TEW6 326 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 DAZLQ92904 295 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 SENP5Q96HI0 755 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 TRIM45Q9H8W5 580 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 WDR41Q9HAD4 459 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 DLGAP4Q9Y2H0 992 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
TSPAN4-220ENST00000532375 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TRBV11-1A0A0K0K1C0 115 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TMEM120BA0PK00 339 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 OR5H15A6NDH6 313 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 PCDH7O60245 1069 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 IL3P08700 152 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 CT62P0C5K7 136 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 S1PR1P21453 382 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TACR1P25103 407 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TRHRP34981 398 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 XKP51811 444 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TAS2R50P59544 299 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TUBA3CQ13748 450 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 ZNF169Q14929 603 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TLR1Q15399 786 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 CHI3L2Q15782 390 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 SPRED3Q2MJR0 410 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 XKR7Q5GH72 579 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 MDS2Q8NDY4 140 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 OR4K14Q8NGD5 310 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 MIB2Q96AX9 1013 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 C19orf60Q96EN9 201 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 CNRIP1Q96F85 164 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 RBM18Q96H35 190 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 FBXL20Q96IG2 436 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 C3orf30Q96M34 536 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 DGAT2Q96PD7 388 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 SIGLEC12Q96PQ1 595 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 SORT1Q99523 831 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 SH3GL2Q99962 352 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 OR8D2Q9GZM6 311 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 HAO1Q9UJM8 370 aa12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 GCN1Q92616 2671 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-220ENST00000532375 TTLL8A6PVC2 850 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 GABRR3A8MPY1 467 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 SLC28A1O00337 649 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 CDK2AP1O14519 115 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 PIP5K1BO14986 540 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 LSM1O15116 133 aaKnown RBP12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 GUCY1B2O75343 617 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 CRCPO75575 148 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 NEURL1O76050 574 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 ZFAND5O76080 213 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 SERPINE1P05121 402 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 ANXA4P09525 319 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 LINC00032P0C843 101 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 CPMP14384 443 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 DRD2P14416 443 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 TNNI3P19429 210 aa12.95□□□□□ -0.34
TSPAN4-220ENST00000532375 BGNP21810 368 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms