RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SLITRK5O94991 958 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 SLC35E2BP0CK96 405 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF16P17020 682 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-227ENST00000530748 PTNP21246 168 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RIN1Q13671 783 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF181Q2M3W8 571 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 SLC27A4Q6P1M0 643 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 KCTD9Q7L273 389 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 CNIH3Q8TBE1 160 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 PXYLP1Q8TE99 480 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 FBRSL1Q9HCM7 1045 aaKnown RBP8.12□□□□□ -1.11
CTNND1-227ENST00000530748 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 SLC7A11Q9UPY5 501 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF860A6NHJ4 632 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 PET100P0DJ07 73 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RPS3AP61247 264 aaKnown RBP8.12□□□□□ -1.11
CTNND1-227ENST00000530748 PON2Q15165 354 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 VMACQ2NL98 169 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 UGT3A2Q3SY77 523 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 HSD17B12Q53GQ0 312 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM236Q5W0B7 351 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 C15orf39Q6ZRI6 1047 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 TOR1AIP2Q8NFQ8 470 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 OR51G2Q8NGK0 314 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 OR8S1Q8NH09 359 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 OR2L2Q8NH16 312 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RFT1Q96AA3 541 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 FKBP10Q96AY3 582 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 CCDC120Q96HB5 630 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM41AQ96HV5 264 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 HSPA12BQ96MM6 686 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 TTTY10Q9BZA0 68 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RXFP3Q9NSD7 469 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 HPF1Q9NWY4 346 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
CTNND1-227ENST00000530748 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 LOC100509620A0A075B734 347 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 IGKV6D-21A0A0A0MT36 114 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 MYADML2A6NDP7 307 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF623O75123 536 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 PEX14O75381 377 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ALDOAP04075 364 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 GGT5P36269 586 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 MAP2K4P45985 399 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 DIO3P55073 304 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF45Q02386 682 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 EIF4HQ15056 248 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 C1orf189Q5VU69 101 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ARHGAP11AQ6P4F7 1023 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 LRRN1Q6UXK5 716 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 DCDC5Q6ZRR9 648 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 SCAMP4Q969E2 229 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CCM2LQ9NUG4 571 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 UBR2Q8IWV8 1755 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 M0QZQ0 153 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CYBAP13498 195 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 GGT1P19440 569 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 RPS3P23396 243 aaKnown RBP eCLIP8.11□□□□□ -1.117e-7■■■□□ 16.1
CTNND1-227ENST00000530748 MAGEA8P43361 318 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 MORN1Q5T089 497 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 GRHL2Q6ISB3 625 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 KCTD18Q6PI47 426 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 SYCE2Q6PIF2 218 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CYS1Q717R9 158 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 FIBINQ8TAL6 211 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 STOML3Q8TAV4 291 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF217O75362 1048 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 DNAJB5O75953 348 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 OAZ2O95190 189 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 LCN1P31025 176 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 RORAP35398 523 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 PPP1R8Q12972 351 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 RUNX3Q13761 415 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ELAVL3Q14576 367 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CATSPEREQ5SY80 951 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 MINDY1Q8N5J2 469 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 NECTIN4Q96NY8 510 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 SERINC2Q96SA4 455 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CNN2Q99439 309 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM121BQ9BXQ6 578 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 HAPLN2Q9GZV7 340 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 ATG5Q9H1Y0 275 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 TAS2R10Q9NYW0 307 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 APOBEC3BQ9UH17 382 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 A0A0G2JPF8 293 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 HNRNPCL3B7ZW38 293 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 PLD2O14939 933 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 XPNPEP2O43895 674 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 HBQ1P09105 142 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 HNRNPCL4P0DMR1 293 aa8.11□□□□□ -1.11
CTNND1-227ENST00000530748 RNH1P13489 461 aaKnown RBP8.11□□□□□ -1.11
CTNND1-227ENST00000530748 CSF2RAP15509 400 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms