RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 FRRS1Q6ZNA5 592 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 LINGO2Q7L985 606 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 RETREG3Q86VR2 466 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ARMC10Q8N2F6 343 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CCDC54Q8NEL0 328 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 FIBINQ8TAL6 211 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 GAB3Q8WWW8 586 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC39A13Q96H72 371 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 C5orf34Q96MH7 638 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 OR51E2Q9H255 320 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 OR51B5Q9H339 312 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PNO1Q9NRX1 252 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 B3GNT2Q9NY97 397 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 GPRC5BQ9NZH0 403 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PCDH10Q9P2E7 1040 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 FKBP7Q9Y680 259 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 H7C1Q1 480 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TSPAN6O43657 245 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ATE1O95260 518 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HSD17B1P14061 328 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF182P17025 639 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HLA-FP30511 346 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TIA1P31483 386 aaKnown RBP eCLIP6.92□□□□□ -1.32e-8■■■■□ 21.1
CTNND1-218ENST00000528232 EXOC3L2Q2M3D2 409 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 REEP3Q6NUK4 255 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC30A6Q6NXT4 461 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 RNF130Q86XS8 419 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 OR10H4Q8NGA5 316 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 RIT1Q92963 219 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 FUBP1Q96AE4 644 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 GIMAP5Q96F15 307 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ALPK1Q96QP1 1244 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF471Q9BX82 626 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 POLR2J2Q9GZM3 115 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PPIL3Q9H2H8 161 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 MTG2Q9H4K7 406 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SNTG1Q9NSN8 517 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ST14Q9Y5Y6 855 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 DAPL1A0PJW8 107 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ANKRD34BA5PLL1 514 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TMEM150CB9EJG8 249 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 AQP9O43315 295 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF8P17098 575 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HRH2P25021 359 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 NRIP1P48552 1158 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HTRA4P83105 476 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PCBP2Q15366 365 aaKnown RBP eCLIP6.92□□□□□ -1.38e-9■■■■□ 26.6
CTNND1-218ENST00000528232 TLR1Q15399 786 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TRAM1Q15629 374 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 MANEALQ5VSG8 457 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC25A25Q6KCM7 469 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC39A5Q6ZMH5 540 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CNTN4Q8IWV2 1026 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SLC15A3Q8IY34 581 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CLIP4Q8N3C7 705 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF527Q8NB42 609 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 COQ8AQ8NI60 647 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 BBS10Q8TAM1 723 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SETD7Q8WTS6 366 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CNTNAP3BQ96NU0 1288 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PSD2Q9BQI7 771 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 NT5DC2Q9H857 520 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PLAGL1Q9UM63 463 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 NME7Q9Y5B8 376 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PCYT1BQ9Y5K3 369 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 DLEC1Q9Y238 1755 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PIGBOS1A0A0B4J2F0 54 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 SOCS7O14512 581 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HLA-DPB1P04440 258 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 JUNP05412 331 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PROS1P07225 676 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 BCKDHAP12694 445 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF33BQ06732 778 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ST3GAL3Q11203 375 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 LCN8Q6JVE9 175 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CGB2Q6NT52 195 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CREB3L2Q70SY1 520 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CEP68Q76N32 757 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 KRTCAP2Q8N6L1 136 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF296Q8WUU4 475 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 OR5P2Q8WZ92 322 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PKP4Q99569 1192 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 YIPF4Q9BSR8 244 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TAPBPLQ9BX59 468 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 CCDC86Q9H6F5 360 aaKnown RBP6.92□□□□□ -1.3
CTNND1-218ENST00000528232 NIPAL2Q9H841 368 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 IL23AQ9NPF7 189 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 ADAP2Q9NPF8 381 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 TREX1Q9NSU2 369 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 HCN4Q9Y3Q4 1203 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 PCDHGA2Q9Y5H1 932 aa6.92□□□□□ -1.3
CTNND1-218ENST00000528232 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms