RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FARSBQ9NSD9 589 aaKnown RBP30.65■■■□□ 2.5
SSSCA1-205ENST00000527920 SLC12A4Q9UP95 1085 aa30.65■■■□□ 2.5
SSSCA1-205ENST00000527920 ERVK-11Q9UQG0 969 aa30.65■■■□□ 2.5
SSSCA1-205ENST00000527920 UTP20O75691 2785 aaKnown RBP30.65■■■□□ 2.5
SSSCA1-205ENST00000527920 NAV2Q8IVL1 2488 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 ARHGAP10A1A4S6 786 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 CYSRT1A8MQ03 144 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 WWP2O00308 870 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 GLRA3O75311 464 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 WISP2O76076 250 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 OR4F21O95013 312 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 GBAP04062 536 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 SHBGP04278 402 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 KLK1P06870 262 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 SLC35E2P0CK97 266 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 CA7P43166 264 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 C1QL3Q5VWW1 255 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 GPRIN3Q6ZVF9 776 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 COMMD6Q7Z4G1 85 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 MDGA2Q7Z553 956 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 SULF2Q8IWU5 870 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 CPSF7Q8N684 471 aaKnown RBP30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 PPWD1Q96BP3 646 aaKnown RBP30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 CCDC126Q96EE4 140 aa30.64■■■□□ 2.5
SSSCA1-205ENST00000527920 GLOD5A6NK44 160 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 NPIPA5E9PKD4 350 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 PEX1O43933 1283 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 OR10H2O60403 315 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 GUCY1B2O75343 617 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 KRT6AP02538 564 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 KRT6BP04259 564 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 KRT6CP48668 564 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 MEOX1P50221 254 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 LCP2Q13094 533 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 CCNYL2Q5T2Q4 361 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 BNC2Q6ZN30 1099 aaPredicted RBP30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 ZFP62Q8NB50 900 aaPredicted RBP30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 PSD4Q8NDX1 1056 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 LIN28AQ9H9Z2 209 aaKnown RBP30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 TEX10Q9NXF1 929 aaPredicted RBP30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 EMCNQ9ULC0 261 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 NPIPA1Q9UND3 350 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 ZNF835Q9Y2P0 537 aa30.63■■■□□ 2.49
SSSCA1-205ENST00000527920 A0A1W2PPM1 405 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 ASNA1O43681 348 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 SLC19A2O60779 497 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 OR6B1O95007 311 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 SOX3P41225 446 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 MAPK12P53778 367 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 PKNOX1P55347 436 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 NAA20P61599 178 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 GALNT1Q10472 559 aaPredicted RBP30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 TBL3Q12788 808 aaKnown RBP30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 RNFT1Q5M7Z0 435 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 NDUFAF5Q5TEU4 345 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 OPN5Q6U736 354 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 DGAT2L6Q6ZPD8 337 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 FJX1Q86VR8 437 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 GHDCQ8N2G8 530 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 CDYL2Q8N8U2 506 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 C16orf52Q8NHV5 167 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 RIT1Q92963 219 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 SGCZQ96LD1 299 aa30.62■■■□□ 2.49
SSSCA1-205ENST00000527920 A1L4Q6 167 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 WASHC1A8K0Z3 465 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 MANBAO00462 879 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 CLDN1O95832 211 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 CSTF3Q12996 717 aaKnown RBP30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 Q6ZPB1 254 aaPredicted RBP30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 C9orf40Q8IXQ3 194 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 GOLM1Q8NBJ4 401 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 MAGED4Q96JG8 741 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 TSPAN10Q9H1Z9 355 aaPredicted RBP30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 ANKZF1Q9H8Y5 726 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 VPS29Q9UBQ0 182 aa30.61■■■□□ 2.49
SSSCA1-205ENST00000527920 TRGV8A0A0C4DH27 118 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 OR6C76A6NM76 312 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 PGRMC2O15173 223 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 ENO1P06733 434 aaKnown RBP30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 CASP6P55212 293 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 PIGGQ5H8A4 983 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 MTFR2Q6P444 385 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 IL20RBQ6UXL0 311 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 RTL4Q6ZR62 310 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 GBP7Q8N8V2 638 aaPredicted RBP30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 UNC79Q9P2D8 2635 aa30.6■■■□□ 2.49
SSSCA1-205ENST00000527920 HRKO00198 91 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 CDH16O75309 829 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 KRT15P19012 456 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 PIK3R1P27986 724 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 CRHR1P34998 444 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 SLCO1A2P46721 670 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 CCT5P48643 541 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 ERVK-8P63133 956 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 CCDC153Q494R4 210 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 ZYG11AQ6WRX3 759 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 SPPL2CQ8IUH8 684 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 SLC15A4Q8N697 577 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 OR4K14Q8NGD5 310 aa30.59■■■□□ 2.49
SSSCA1-205ENST00000527920 CNPPD1Q9BV87 410 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms