RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 UGDHO60701 494 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SUPT3HO75486 399 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ZFAND5O76080 213 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 MYO1DO94832 1006 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SCELO95171 688 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 KLHL2O95198 593 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ATE1O95260 518 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 GLI4P10075 376 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 TYK2P29597 1187 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 UQCRC1P31930 480 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 GMPRP36959 345 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PIK3CBP42338 1070 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 MSH2P43246 934 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ALDH18A1P54886 795 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PPIAP62937 165 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SLC13A2Q13183 592 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 BIKQ13323 160 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SERTAD2Q14140 314 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SETDB1Q15047 1291 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PCBP2Q15366 365 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ELAVL1Q15717 326 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 FLYWCH1Q4VC44 716 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 GLE1Q53GS7 698 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 DEPDC1Q5TB30 811 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 MROH9Q5TGP6 573 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SHEQ5VZ18 495 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ADNP2Q6IQ32 1131 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 GRHL2Q6ISB3 625 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF585AQ6P3V2 769 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 WDR53Q7Z5U6 358 aaPredicted RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 UBE3DQ7Z6J8 389 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 CYP4Z2PQ8N1L4 340 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 ACOT4Q8N9L9 421 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 MORN4Q8NDC4 146 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 TMEM52Q8NDY8 209 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 OR52N2Q8NGI0 321 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 OR5M9Q8NGP3 310 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 KCTD4Q8WVF5 259 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 DAZLQ92904 295 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 CMTM7Q96FZ5 175 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 GPR78Q96P69 363 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 DMRT3Q9NQL9 472 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 SNX15Q9NRS6 342 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PNO1Q9NRX1 252 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PNPLA3Q9NST1 481 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 MS4A12Q9NXJ0 267 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 B4GALT7Q9UBV7 327 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 Q9UFV3 132 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 PCDHGA11Q9Y5H2 935 aa9.75□□□□□ -0.85
CPSF1-203ENST00000527916 TNPO3Q9Y5L0 923 aaKnown RBP9.75□□□□□ -0.85
CPSF1-203ENST00000527916 A8MUA0 341 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 H0YIV9 168 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 TGFBR3LH3BV60 316 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 SYT5O00445 386 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 ARHGEF9O43307 516 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 TGFB1P01137 390 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 HIST1H1TP22492 207 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 CERS1P27544 350 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 PCSK6P29122 969 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 HNRNPFP52597 415 aaKnown RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 GPR85P60893 370 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 PPP2R2BQ00005 443 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 PLGLB1Q02325 96 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 AP5B1Q2VPB7 878 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 KLC3Q6P597 504 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF793Q6ZN11 406 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 GPALPP1Q8IXQ4 340 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 FAM47BQ8NA70 645 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 OR8K3Q8NH51 312 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 PTPMT1Q8WUK0 201 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 SLC44A1Q8WWI5 657 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 EXT2Q93063 718 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 ISL2Q96A47 359 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 C16orf45Q96MC5 204 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 SMC6Q96SB8 1091 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 CCDC77Q9BR77 488 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 ALOXE3Q9BYJ1 711 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 NINJ2Q9NZG7 142 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 ZNF223Q9UK11 482 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 YARS2Q9Y2Z4 477 aaKnown RBP9.74□□□□□ -0.85
CPSF1-203ENST00000527916 CLCA3PQ9Y6N3 262 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 SPACA6W5XKT8 324 aa9.74□□□□□ -0.85
CPSF1-203ENST00000527916 TRBV11-1A0A0K0K1C0 115 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 WDR1O75083 606 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 ITGA10O75578 1167 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 LY6G6DO95868 133 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 ALDOAP04075 364 aaKnown RBP9.73□□□□□ -0.85
CPSF1-203ENST00000527916 RBP1P09455 135 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 COL6A2P12110 1019 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 GFAPP14136 432 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 PTX3P26022 381 aaPredicted RBP9.73□□□□□ -0.85
CPSF1-203ENST00000527916 CNTFP26441 200 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 MAGEA12P43365 314 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 PIK3CGP48736 1102 aa9.73□□□□□ -0.85
CPSF1-203ENST00000527916 SERPINB8P50452 374 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms